RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SDIM1Q6ZPB5 146 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 LINC00311Q8N616 119 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 VSIG2Q96IQ7 327 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 SPRY4Q9C004 299 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 LENEPQ9Y5L5 61 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 IGHG3P01860 377 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 TEX36Q5VZQ5 186 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 SPRR3Q9UBC9 169 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 TRAV25A0A0B4J276 109 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 NBASA2RRP1 2371 aa8.05□□□□□ -1.12
LIN54-202ENST00000442461 IGKV1-17P01599 117 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
LIN54-202ENST00000442461 FOXE3Q13461 319 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 RNASE6Q93091 150 aaKnown RBP8.04□□□□□ -1.12
LIN54-202ENST00000442461 ABCA4P78363 2273 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 TRBV30A0A0K0K1B3 111 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 NBL1P41271 181 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 Q6ZQT7 251 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 NLRC5Q86WI3 1866 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 THSD7AQ9UPZ6 1657 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 TRBV7-3A0A075B6L6 115 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
LIN54-202ENST00000442461 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 ATP1A1-AS1Q5TC04 95 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 FRMPD3Q5JV73 1810 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 INS-IGF2F8WCM5 200 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 INSP01308 110 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 DTX1Q86Y01 620 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 ZNF71Q9NQZ8 489 aaPredicted RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 GOLGB1Q14789 3259 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 FNDC1Q4ZHG4 1894 aaPredicted RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 PCDH15Q96QU1 1955 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 RPL39P62891 51 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 DAZ2Q13117 558 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 DAZ4Q86SG3 579 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 DAZ1Q9NQZ3 744 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 DAZ3Q9NR90 486 aaKnown RBP8.03□□□□□ -1.12
LIN54-202ENST00000442461 ZSWIM8A7E2V4 1837 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 DAD1P61803 113 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 CRIP3Q6Q6R5 217 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 RHPN1-AS1Q9BWJ2 59 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 PCNX1Q96RV3 2341 aa8.03□□□□□ -1.12
LIN54-202ENST00000442461 TRGV4A0A0C4DH28 118 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 TRIAP1O43715 76 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 TRIP6Q15654 476 aaKnown RBP8.02□□□□□ -1.13
LIN54-202ENST00000442461 KRTAP27-1Q3LI81 207 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 FDCSPQ8NFU4 85 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 MPLKIPQ8TAP9 179 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 USP17L23D6RBM5 183 aa8.02□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3OR16-10A0A075B7F0 116 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 LYNX1G3V0Z9 82 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 LYNX1P0DP58 116 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 C1orf210Q8IVY1 113 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
LIN54-202ENST00000442461 COX7A2LO14548 114 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 GATA4P43694 442 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 DAND5Q8N907 189 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 U3KQK5 164 aa8.01□□□□□ -1.13
LIN54-202ENST00000442461 SMIM26A0A096LP01 95 aa8□□□□□ -1.13
LIN54-202ENST00000442461 SPRY2O43597 315 aa8□□□□□ -1.13
LIN54-202ENST00000442461 CXCL5P42830 114 aa8□□□□□ -1.13
LIN54-202ENST00000442461 BRWD1-AS2P59051 145 aa8□□□□□ -1.13
LIN54-202ENST00000442461 MINOS1Q5TGZ0 78 aa8□□□□□ -1.13
LIN54-202ENST00000442461 LYPD2Q6UXB3 125 aa8□□□□□ -1.13
LIN54-202ENST00000442461 VMO1Q7Z5L0 202 aa8□□□□□ -1.13
LIN54-202ENST00000442461 NFE4Q86UQ8 179 aa8□□□□□ -1.13
LIN54-202ENST00000442461 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
LIN54-202ENST00000442461 MRPL36Q9P0J6 103 aaKnown RBP8□□□□□ -1.13
LIN54-202ENST00000442461 MINOS1-NBL1R4GNA1 71 aa8□□□□□ -1.13
LIN54-202ENST00000442461 PLXNA2O75051 1894 aa8□□□□□ -1.13
LIN54-202ENST00000442461 PCNX3Q9H6A9 2034 aa8□□□□□ -1.13
LIN54-202ENST00000442461 IGHV1OR15-1A0A075B7D0 117 aa8□□□□□ -1.13
LIN54-202ENST00000442461 GNRH2O43555 120 aa8□□□□□ -1.13
LIN54-202ENST00000442461 C11orf53Q8IXP5 236 aa8□□□□□ -1.13
LIN54-202ENST00000442461 DIAPH2-AS1Q14236 149 aa8□□□□□ -1.13
LIN54-202ENST00000442461 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
LIN54-202ENST00000442461 LECT2O14960 151 aa8□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3-30-3P0DP02 117 aa8□□□□□ -1.13
LIN54-202ENST00000442461 MIAQ16674 131 aa8□□□□□ -1.13
LIN54-202ENST00000442461 TMEM61Q8N0U2 210 aa8□□□□□ -1.13
LIN54-202ENST00000442461 TRGV1A0A0A0MS02 117 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 A0A0J9YXY3 114 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 PRB1P04280 392 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 UCNP55089 124 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 SUMO4Q6EEV6 95 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 FAM110DQ8TAY7 271 aaPredicted RBP7.99□□□□□ -1.13
LIN54-202ENST00000442461 C2CD3Q4AC94 2353 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 TRBV12-3P01733 135 aa7.99□□□□□ -1.13
LIN54-202ENST00000442461 TICRRQ7Z2Z1 1910 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 I3L2K1 104 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 ATP5EP2Q5VTU8 51 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 SP5Q6BEB4 398 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms