RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 C20orf78Q9BR46 151 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 TMEM70Q9BUB7 260 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 SONP18583 2426 aaKnown RBP4.46□□□□□ -1.7
VPS50-205ENST00000441602 K7EMI3 77 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 NPYP01303 97 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 FXYD7P58549 80 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 Q6ZWC4 215 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 VAMP8Q9BV40 100 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 ZNF256Q9Y2P7 627 aaPredicted RBP4.46□□□□□ -1.7
VPS50-205ENST00000441602 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 TCAPO15273 167 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
VPS50-205ENST00000441602 ODF3L2Q3SX64 289 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 GTSCR1Q86UQ5 136 aa4.46□□□□□ -1.7
VPS50-205ENST00000441602 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 ADARB2-AS1A8MUL3 147 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 SMKR1H3BMG3 65 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 ORMDL2Q53FV1 153 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 Q8N1Y9 231 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 C14orf178Q8N769 122 aaPredicted RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 LINC00482Q8N8I6 264 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 PTH2Q96A98 100 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 NDUFAF3Q9BU61 184 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 UNC79Q9P2D8 2635 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 A8MWV9 139 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 RHODO00212 210 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 C3orf79P0CE67 100 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 IFI27P40305 119 aaPredicted RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 KIR3DS1Q14943 382 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 PRR31Q5SQ13 230 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 ST20Q9HBF5 79 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 TLN2Q9Y4G6 2542 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 FLNAP21333 2647 aaKnown RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 FASNP49327 2511 aaKnown RBP4.45□□□□□ -1.7
VPS50-205ENST00000441602 M0R2P5 195 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 ATP5LO75964 103 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 ZNF56Q15929 161 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
VPS50-205ENST00000441602 PRSS47A8MTI9 375 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 HTN1P15515 57 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 FCER1GP30273 86 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 ZNF876PQ49A33 203 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 ZMAT5Q9UDW3 170 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 UTP20O75691 2785 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 RPL32P62910 135 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 LAGE3Q14657 143 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 Q6ZQT7 251 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 DEFB125Q8N687 156 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 COL12A1Q99715 3063 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 APCP25054 2843 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 RBMY1BA6NDE4 496 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 RBMY1EA6NEQ0 496 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 RBMY1DP0C7P1 496 aaKnown RBP4.44□□□□□ -1.7
VPS50-205ENST00000441602 HIST2H2BDQ6DRA6 164 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 TEX43Q6ZNM6 134 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
VPS50-205ENST00000441602 FBN2P35556 2912 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 VCYO14598 125 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 NUDT3O95989 172 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 FAM74A4Q5TZK3 123 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 ZNF705AQ6ZN79 300 aaPredicted RBP4.43□□□□□ -1.7
VPS50-205ENST00000441602 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 KIR2DL4Q99706 377 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 MYO9AB2RTY4 2548 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 CRXO43186 299 aaPredicted RBP4.43□□□□□ -1.7
VPS50-205ENST00000441602 ZNF575Q86XF7 245 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 IFI27L1Q96BM0 104 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 DCHS2Q6V1P9 2916 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 RELNP78509 3460 aa4.43□□□□□ -1.7
VPS50-205ENST00000441602 IGHV3OR16-12A0A075B7B8 117 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 NRACQ8N912 160 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 CITED1Q99966 193 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 NOTCH2Q04721 2471 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 ACANP16112 2415 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 LINC01546A6NGU7 62 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 RPL35AP18077 110 aaKnown RBP4.42□□□□□ -1.7
VPS50-205ENST00000441602 ZNF124Q15973 351 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 ZNF747Q9BV97 191 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 PRO1933Q9H354 126 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 TRAV9-2A0A087WT02 112 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 A0A087WWL8 130 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 CIDEAO60543 219 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 KRTAP10-3P60369 221 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 RRN3P1Q2M238 152 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 CSTL1Q9H114 145 aa4.42□□□□□ -1.7
VPS50-205ENST00000441602 TRAV26-2A0A0B4J265 109 aa4.41□□□□□ -1.7
VPS50-205ENST00000441602 PRSS1P07477 247 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms