RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 WDR73Q6P4I2 378 aa16.63■□□□□ 0.25
CPSF4-204ENST00000436336 C11orf72Q8NBR9 251 aa16.63■□□□□ 0.25
CPSF4-204ENST00000436336 RNASE8Q8TDE3 154 aaKnown RBP16.63■□□□□ 0.25
CPSF4-204ENST00000436336 RNF183Q96D59 192 aa16.63■□□□□ 0.25
CPSF4-204ENST00000436336 FAM210BQ96KR6 192 aa16.63■□□□□ 0.25
CPSF4-204ENST00000436336 PHLDA3Q9Y5J5 127 aa16.63■□□□□ 0.25
CPSF4-204ENST00000436336 SMIM9A6NGZ8 99 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 CACNG7P62955 275 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 RIGQ13278 110 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 ZNF493Q6ZR52 646 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 OR10AG1Q8NH19 301 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 C16orf74Q96GX8 76 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 X6R8D5 127 aa16.62■□□□□ 0.25
CPSF4-204ENST00000436336 MUC21A0A0G2JKD1 596 aa16.61■□□□□ 0.25
CPSF4-204ENST00000436336 MUC21A0A140T8X8 626 aa16.61■□□□□ 0.25
CPSF4-204ENST00000436336 DEFB121Q5J5C9 76 aa16.61■□□□□ 0.25
CPSF4-204ENST00000436336 SPANXN1Q5VSR9 72 aa16.61■□□□□ 0.25
CPSF4-204ENST00000436336 GSN-AS1Q9NRJ2 163 aa16.61■□□□□ 0.25
CPSF4-204ENST00000436336 IGHV4-4A0A075B6R2 117 aa16.6■□□□□ 0.25
CPSF4-204ENST00000436336 A0A1B0GXF2 115 aa16.6■□□□□ 0.25
CPSF4-204ENST00000436336 NTF3P20783 257 aa16.6■□□□□ 0.25
CPSF4-204ENST00000436336 RASL11AQ6T310 242 aa16.6■□□□□ 0.25
CPSF4-204ENST00000436336 TP53TG1Q9Y2A0 90 aa16.6■□□□□ 0.25
CPSF4-204ENST00000436336 A0A1B0GW15 77 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 SPRY2O43597 315 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 HBBP68871 147 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 OR11H2Q8NH07 326 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 SPXQ9BT56 116 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 SSTP61278 116 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 TWIST1Q15672 202 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 ZFP82Q8N141 532 aa16.59■□□□□ 0.25
CPSF4-204ENST00000436336 SNURFLB1AK76 121 aa16.58■□□□□ 0.24
CPSF4-204ENST00000436336 COX19Q49B96 90 aa16.58■□□□□ 0.24
CPSF4-204ENST00000436336 IL17DQ8TAD2 202 aa16.58■□□□□ 0.24
CPSF4-204ENST00000436336 M0R381 172 aa16.57■□□□□ 0.24
CPSF4-204ENST00000436336 NXPH4O95158 308 aa16.57■□□□□ 0.24
CPSF4-204ENST00000436336 S100A8P05109 93 aa16.57■□□□□ 0.24
CPSF4-204ENST00000436336 CAMPP49913 170 aa16.57■□□□□ 0.24
CPSF4-204ENST00000436336 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.57■□□□□ 0.24
CPSF4-204ENST00000436336 RAB5AP20339 215 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 SYT8Q8NBV8 401 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 PLAC8L1A1L4L8 177 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 M0R2P5 195 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 DMRTA1Q5VZB9 504 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 PTH2Q96A98 100 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 OVOL2Q9BRP0 275 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 MSRB1Q9NZV6 116 aa16.56■□□□□ 0.24
CPSF4-204ENST00000436336 MIFP14174 115 aa16.55■□□□□ 0.24
CPSF4-204ENST00000436336 SBSPONQ8IVN8 264 aa16.55■□□□□ 0.24
CPSF4-204ENST00000436336 DAZ2Q13117 558 aaKnown RBP16.54■□□□□ 0.24
CPSF4-204ENST00000436336 ZNF876PQ49A33 203 aa16.54■□□□□ 0.24
CPSF4-204ENST00000436336 GATD1Q8NB37 220 aa16.54■□□□□ 0.24
CPSF4-204ENST00000436336 MRAPQ8TCY5 172 aa16.54■□□□□ 0.24
CPSF4-204ENST00000436336 GNB1LQ9BYB4 327 aa16.54■□□□□ 0.24
CPSF4-204ENST00000436336 PIK3CD-AS1Q5SR53 167 aa16.53■□□□□ 0.24
CPSF4-204ENST00000436336 TRGC1P0CF51 173 aa16.53■□□□□ 0.24
CPSF4-204ENST00000436336 RPS10P46783 165 aaKnown RBP16.53■□□□□ 0.24
CPSF4-204ENST00000436336 RAB4BP61018 213 aa16.53■□□□□ 0.24
CPSF4-204ENST00000436336 TMEM136Q6ZRR5 245 aa16.53■□□□□ 0.24
CPSF4-204ENST00000436336 HLA-DQA1P01909 254 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 MT-ND6P03923 174 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 Q8NAQ8 132 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 NDUFAF3Q9BU61 184 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 TMEM191AQ9H0A3 160 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 RETNQ9HD89 108 aa16.51■□□□□ 0.23
CPSF4-204ENST00000436336 NOP10Q9NPE3 64 aaKnown RBP16.51■□□□□ 0.23
CPSF4-204ENST00000436336 IGHV4-28A0A0C4DH34 117 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 LGALS9BQ3B8N2 356 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 SMIM15Q7Z3B0 74 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 RASL10AQ92737 203 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 AP1S3Q96PC3 154 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 SPATA25Q9BR10 227 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 TM2D3Q9BRN9 247 aa16.5■□□□□ 0.23
CPSF4-204ENST00000436336 MRPL16Q9NX20 251 aaKnown RBP16.5■□□□□ 0.23
CPSF4-204ENST00000436336 TRAPPC1Q9Y5R8 145 aa16.49■□□□□ 0.23
CPSF4-204ENST00000436336 NBEAL2Q6ZNJ1 2754 aa16.49■□□□□ 0.23
CPSF4-204ENST00000436336 EVI2AP22794 236 aa16.48■□□□□ 0.23
CPSF4-204ENST00000436336 EMP1P54849 157 aa16.48■□□□□ 0.23
CPSF4-204ENST00000436336 TRGV1A0A0A0MS02 117 aa16.48■□□□□ 0.23
CPSF4-204ENST00000436336 NACAE9PAV3 2078 aa16.47■□□□□ 0.23
CPSF4-204ENST00000436336 FRZBQ92765 325 aa16.47■□□□□ 0.23
CPSF4-204ENST00000436336 MRPL18Q9H0U6 180 aaKnown RBP16.47■□□□□ 0.23
CPSF4-204ENST00000436336 A8MWV9 139 aa16.46■□□□□ 0.23
CPSF4-204ENST00000436336 Q6ZTI0 123 aa16.46■□□□□ 0.23
CPSF4-204ENST00000436336 C14orf178Q8N769 122 aaPredicted RBP16.46■□□□□ 0.23
CPSF4-204ENST00000436336 DPH3P1Q9H4G8 78 aa16.46■□□□□ 0.23
CPSF4-204ENST00000436336 JPT2Q9H910 190 aa16.46■□□□□ 0.23
CPSF4-204ENST00000436336 FAM104BQ5XKR9 115 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 TRGC2P03986 189 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 SMIM17P0DL12 118 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 FABP9Q0Z7S8 132 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 SLAQ13239 276 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 AMN1Q8IY45 258 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 KIF25-AS1Q9Y6Z4 181 aa16.45■□□□□ 0.22
CPSF4-204ENST00000436336 LYRM9A8MSI8 78 aa16.44■□□□□ 0.22
CPSF4-204ENST00000436336 DEFB4AO15263 64 aa16.44■□□□□ 0.22
CPSF4-204ENST00000436336 APCSP02743 223 aa16.44■□□□□ 0.22
CPSF4-204ENST00000436336 DEFA6Q01524 100 aa16.44■□□□□ 0.22
CPSF4-204ENST00000436336 B9D2Q9BPU9 175 aa16.44■□□□□ 0.22
CPSF4-204ENST00000436336 RS1O15537 224 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms