RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 KLLNB2CW77 178 aa13.98□□□□□ -0.17
CLK1-205ENST00000434813 KIR3DS1Q14943 382 aa13.98□□□□□ -0.17
CLK1-205ENST00000434813 HHLA3Q9XRX5 114 aa13.98□□□□□ -0.17
CLK1-205ENST00000434813 IGKCP01834 107 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 NMUP48645 174 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 Q96MF0 132 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 NXPH4O95158 308 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 RNASE3P12724 160 aaKnown RBP13.97□□□□□ -0.17
CLK1-205ENST00000434813 TCTAP57738 103 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 C20orf78Q9BR46 151 aa13.97□□□□□ -0.17
CLK1-205ENST00000434813 DPM2O94777 84 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 IGHV4-31P0DP07 118 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 SRD5A1P18405 259 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 HSD52Q0P140 79 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 PCP2Q8IVA1 136 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 MYOZ3Q8TDC0 251 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 RASL10AQ92737 203 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 AP1S3Q96PC3 154 aa13.96□□□□□ -0.17
CLK1-205ENST00000434813 SUMO2P61956 95 aaKnown RBP13.95□□□□□ -0.18
CLK1-205ENST00000434813 ADAMTSL5Q6ZMM2 481 aa13.95□□□□□ -0.18
CLK1-205ENST00000434813 SELENOKQ9Y6D0 94 aa13.95□□□□□ -0.18
CLK1-205ENST00000434813 K7EMI3 77 aa13.95□□□□□ -0.18
CLK1-205ENST00000434813 GNRH2O43555 120 aa13.95□□□□□ -0.18
CLK1-205ENST00000434813 VAMP3Q15836 100 aa13.95□□□□□ -0.18
CLK1-205ENST00000434813 C14orf178Q8N769 122 aaPredicted RBP13.95□□□□□ -0.18
CLK1-205ENST00000434813 APCP25054 2843 aa13.94□□□□□ -0.18
CLK1-205ENST00000434813 SPRY2O43597 315 aa13.94□□□□□ -0.18
CLK1-205ENST00000434813 ORMDL2Q53FV1 153 aa13.94□□□□□ -0.18
CLK1-205ENST00000434813 C10orf99Q6UWK7 81 aa13.94□□□□□ -0.18
CLK1-205ENST00000434813 FOSL1P15407 271 aa13.93□□□□□ -0.18
CLK1-205ENST00000434813 POM121L12Q8N7R1 296 aa13.93□□□□□ -0.18
CLK1-205ENST00000434813 FLNBO75369 2602 aaKnown RBP13.93□□□□□ -0.18
CLK1-205ENST00000434813 C7orf71A4D174 169 aa13.93□□□□□ -0.18
CLK1-205ENST00000434813 CBY3A6NI87 242 aa13.93□□□□□ -0.18
CLK1-205ENST00000434813 VPREB3Q9UKI3 123 aa13.93□□□□□ -0.18
CLK1-205ENST00000434813 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
CLK1-205ENST00000434813 FSHBP01225 129 aa13.92□□□□□ -0.18
CLK1-205ENST00000434813 RPL39LQ96EH5 51 aaKnown RBP13.92□□□□□ -0.18
CLK1-205ENST00000434813 ODF3Q96PU9 254 aa13.92□□□□□ -0.18
CLK1-205ENST00000434813 A0A087WX48 190 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 MGPP08493 103 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 HLA-DRB4P13762 266 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 ERASQ7Z444 233 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
CLK1-205ENST00000434813 HLA-DRB4X5D2U9 266 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 UNC79Q9P2D8 2635 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 PPP1R17O96001 155 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 ZC2HC1BQ5TFG8 222 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 FAM159AQ6UWV7 190 aa13.91□□□□□ -0.18
CLK1-205ENST00000434813 TRAV12-1A0A0B4J245 112 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 A6NDN8 102 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.9□□□□□ -0.18
CLK1-205ENST00000434813 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 LGALS1P09382 135 aaKnown RBP13.9□□□□□ -0.18
CLK1-205ENST00000434813 OR4C5Q8NGB2 326 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 HIGD1BQ9P298 99 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
CLK1-205ENST00000434813 CSPG4Q6UVK1 2322 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 ELANEP08246 267 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 PLNP26678 52 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 GTSCR1Q86UQ5 136 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 KRTAP1-3Q8IUG1 177 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 ZANQ9Y493 2812 aa13.89□□□□□ -0.19
CLK1-205ENST00000434813 K7EQG2 157 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 ZNF688P0C7X2 276 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 SNRPD3P62318 126 aaKnown RBP13.88□□□□□ -0.19
CLK1-205ENST00000434813 Q6YL49 198 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 TMEM160Q9NX00 188 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 A0A0J9YX75 114 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 LGALS9O00182 355 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 LINC00315P59091 139 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 ZNF702PQ9H963 129 aa13.88□□□□□ -0.19
CLK1-205ENST00000434813 H3BRM9 83 aa13.87□□□□□ -0.19
CLK1-205ENST00000434813 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 TRAV12-3A0A0B4J271 114 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 RPL32P62910 135 aaKnown RBP13.86□□□□□ -0.19
CLK1-205ENST00000434813 AMMECR1LQ6DCA0 310 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 SCGB3A1Q96QR1 104 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 IGHV4OR15-8A0A075B7B6 117 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 A0A087WW49 117 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 F8VRH5 84 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 K7EP13 123 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 CD7P09564 240 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 SYNJ2BPP57105 145 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 TTTY13Q9BZ97 58 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 MUC4Q99102 2169 aa13.86□□□□□ -0.19
CLK1-205ENST00000434813 H7C1H1 209 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 UBE2E2Q96LR5 201 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 CR1P17927 2039 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 C2orf66Q6UXQ4 117 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 NEXN-AS1Q8NBZ9 246 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 WFDC11Q8NEX6 87 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 WFDC12Q8WWY7 111 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
CLK1-205ENST00000434813 C9orf85Q96MD7 179 aa13.84□□□□□ -0.19
CLK1-205ENST00000434813 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
CLK1-205ENST00000434813 TRBV25-1A0A075B6N4 114 aa13.83□□□□□ -0.2
CLK1-205ENST00000434813 C9orf118A6NHY6 69 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms