RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 LEPP41159 167 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 SEC11AP67812 179 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 FOXE3Q13461 319 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 SPANXN1Q5VSR9 72 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
TVP23C-203ENST00000428082 TRAV21A0A0B4J279 112 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 IGHV7-4-1A0A0J9YVY3 117 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 TMEM89A2RUT3 159 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 ATP5LO75964 103 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 SAMD13Q5VXD3 122 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 MRAP2Q96G30 205 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 C11orf21Q9P2W6 132 aa11.85□□□□□ -0.51
TVP23C-203ENST00000428082 ELANEP08246 267 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.84□□□□□ -0.51
TVP23C-203ENST00000428082 IGHV3-11P01762 117 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 TCTEX1D4Q5JR98 221 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 HIST2H2BDQ6DRA6 164 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 RNF152Q8N8N0 203 aa11.84□□□□□ -0.51
TVP23C-203ENST00000428082 MED14OSP0DP75 135 aa11.83□□□□□ -0.52
TVP23C-203ENST00000428082 ANKRD39Q53RE8 183 aa11.83□□□□□ -0.52
TVP23C-203ENST00000428082 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
TVP23C-203ENST00000428082 C2orf91Q6ZV80 131 aa11.83□□□□□ -0.52
TVP23C-203ENST00000428082 OR4X2Q8NGF9 303 aa11.83□□□□□ -0.52
TVP23C-203ENST00000428082 SOCS3O14543 225 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 TAX1BP3O14907 124 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 FGF6P10767 208 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 EVI2AP22794 236 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 PROK1P58294 105 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 VAMP3Q15836 100 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 PRIMA1Q86XR5 153 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 MYOZ3Q8TDC0 251 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 CCL25O15444 150 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 LAGE3Q14657 143 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 UNQ9165/PRO28630Q6UXU0 137 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 UFC1Q9Y3C8 167 aa11.82□□□□□ -0.52
TVP23C-203ENST00000428082 IGLV2-18A0A075B6J9 118 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 PRSS1P07477 247 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 FXYD7P58549 80 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 C11orf44Q8N8P7 122 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 C20orf173Q96LM9 149 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 TP73-AS1Q9UF72 201 aa11.81□□□□□ -0.52
TVP23C-203ENST00000428082 A6NDN8 102 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 K7EMI3 77 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 K7EMT4 169 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 ASIPP42127 132 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 HSD52Q0P140 79 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 NRACQ8N912 160 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 TMEM158Q8WZ71 300 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 ZMAT4Q9H898 229 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 PEF1Q9UBV8 284 aaKnown RBP11.8□□□□□ -0.52
TVP23C-203ENST00000428082 TRBV12-3P01733 135 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 CD28P10747 220 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
TVP23C-203ENST00000428082 GPHB5Q86YW7 130 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 OR4C5Q8NGB2 326 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
TVP23C-203ENST00000428082 H3BVH4 76 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 PPP1R17O96001 155 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 ODF1Q14990 250 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 C18orf65Q6ZTR6 163 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 APRG1Q8IVJ8 170 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 FAM19A4Q96LR4 140 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 UBE2E2Q96LR5 201 aa11.79□□□□□ -0.52
TVP23C-203ENST00000428082 DAZ1Q9NQZ3 744 aaKnown RBP11.79□□□□□ -0.52
TVP23C-203ENST00000428082 IGKCP01834 107 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 ID1P41134 155 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
TVP23C-203ENST00000428082 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 ATRQ13535 2644 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 DPM2O94777 84 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 GAS8-AS1O95177 125 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 SMIM17P0DL12 118 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 GATA1P15976 413 aaPredicted RBP11.78□□□□□ -0.52
TVP23C-203ENST00000428082 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 KRTAP24-1Q3LI83 254 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 Q6ZVH6 145 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 C20orf78Q9BR46 151 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 DPH3P1Q9H4G8 78 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 DKK2Q9UBU2 259 aa11.78□□□□□ -0.52
TVP23C-203ENST00000428082 HLA-DRB4P13762 266 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 NMUP48645 174 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 PRR9Q5T870 116 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 CITED2Q99967 270 aaPredicted RBP11.77□□□□□ -0.53
TVP23C-203ENST00000428082 CBY1Q9Y3M2 126 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 HLA-DRB4X5D2U9 266 aa11.77□□□□□ -0.53
TVP23C-203ENST00000428082 M0R381 172 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 LGALS1P09382 135 aaKnown RBP11.76□□□□□ -0.53
TVP23C-203ENST00000428082 H3BRM9 83 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 K7EP13 123 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 AP1S3Q96PC3 154 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 SMIM2Q9BVW6 85 aa11.76□□□□□ -0.53
TVP23C-203ENST00000428082 HIGD1BQ9P298 99 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms