RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 IGHV3-16A0A0C4DH30 117 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 SNAI2O43623 268 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 NTF3P20783 257 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 SPANXN1Q5VSR9 72 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 ZNF705AQ6ZN79 300 aaPredicted RBP7.51□□□□□ -1.21
MDC1-205ENST00000425072 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 SYT8Q8NBV8 401 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 RCHY1Q96PM5 261 aa7.51□□□□□ -1.21
MDC1-205ENST00000425072 RYR3Q15413 4870 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 SPINK4O60575 86 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 RBMY1A1P0DJD3 496 aaKnown RBP7.5□□□□□ -1.21
MDC1-205ENST00000425072 RBMY1CP0DJD4 496 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 RNASE3P12724 160 aaKnown RBP7.5□□□□□ -1.21
MDC1-205ENST00000425072 CTRLP40313 264 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 RBMY1FQ15415 496 aaKnown RBP7.5□□□□□ -1.21
MDC1-205ENST00000425072 TWIST1Q15672 202 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 PIK3CD-AS1Q5SR53 167 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
MDC1-205ENST00000425072 PTH2Q96A98 100 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 C16orf74Q96GX8 76 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 YPEL4Q96NS1 127 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 GNB1LQ9BYB4 327 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 SCRT2Q9NQ03 307 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 MDFICQ9P1T7 246 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 TP53TG1Q9Y2A0 90 aa7.5□□□□□ -1.21
MDC1-205ENST00000425072 TIMM8BQ9Y5J9 83 aaPredicted RBP7.5□□□□□ -1.21
MDC1-205ENST00000425072 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
MDC1-205ENST00000425072 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 H3BVH4 76 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 SPRY2O43597 315 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 MT-ND6P03923 174 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 RAB5AP20339 215 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 HBBP68871 147 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 RNF183Q96D59 192 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 NDUFAF3Q9BU61 184 aa7.49□□□□□ -1.21
MDC1-205ENST00000425072 M0R2P5 195 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 LCE2BO14633 110 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 MIFP14174 115 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
MDC1-205ENST00000425072 CAMPP49913 170 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 RAB4BP61018 213 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 SSTP61278 116 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 LGALS9BQ3B8N2 356 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
MDC1-205ENST00000425072 OR11H2Q8NH07 326 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 C9orf85Q96MD7 179 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 GSN-AS1Q9NRJ2 163 aa7.48□□□□□ -1.21
MDC1-205ENST00000425072 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 SMIM17P0DL12 118 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 AZU1P20160 251 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 DAZ2Q13117 558 aaKnown RBP7.47□□□□□ -1.21
MDC1-205ENST00000425072 DEFB135Q30KP9 77 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 TMEM191AQ9H0A3 160 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
MDC1-205ENST00000425072 A0A1B0GXF2 115 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 K7EIL1 84 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 M0R381 172 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 TNP2Q05952 138 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.46□□□□□ -1.22
MDC1-205ENST00000425072 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 OR10AG1Q8NH19 301 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 RNASE8Q8TDE3 154 aaKnown RBP7.46□□□□□ -1.22
MDC1-205ENST00000425072 RASL10AQ92737 203 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 FRZBQ92765 325 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 MUC4Q99102 2169 aa7.46□□□□□ -1.22
MDC1-205ENST00000425072 MUC21A0A0G2JKD1 596 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 MUC21A0A140T8X8 626 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 A8MWV9 139 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 CIDEAO60543 219 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 NXPH4O95158 308 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 APCSP02743 223 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 PRM2P04554 102 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 FABP9Q0Z7S8 132 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 GATD1Q8NB37 220 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 MSRB1Q9NZV6 116 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 X6R8D5 127 aa7.45□□□□□ -1.22
MDC1-205ENST00000425072 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
MDC1-205ENST00000425072 TMEM136Q6ZRR5 245 aa7.44□□□□□ -1.22
MDC1-205ENST00000425072 AP1S3Q96PC3 154 aa7.44□□□□□ -1.22
MDC1-205ENST00000425072 DPH3P1Q9H4G8 78 aa7.44□□□□□ -1.22
MDC1-205ENST00000425072 ZMAT4Q9H898 229 aa7.44□□□□□ -1.22
MDC1-205ENST00000425072 LYRM9A8MSI8 78 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 PPBPP02775 128 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 MRAPQ8TCY5 172 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 SPATA25Q9BR10 227 aa7.43□□□□□ -1.22
MDC1-205ENST00000425072 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
MDC1-205ENST00000425072 NOP10Q9NPE3 64 aaKnown RBP7.43□□□□□ -1.22
MDC1-205ENST00000425072 TRGV1A0A0A0MS02 117 aa7.42□□□□□ -1.22
MDC1-205ENST00000425072 TEX48A0A1B0GUV7 120 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms