RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 E9PLD3 99 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 TRBV7-3A0A075B6L6 115 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 XCL1P47992 114 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 INSL3P51460 131 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 TMEM61Q8N0U2 210 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 DKK2Q9UBU2 259 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 KLK9Q9UKQ9 250 aa5.83□□□□□ -1.48
PTPN3-203ENST00000412145 K7ERJ3 54 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 COX7BP24311 80 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 SIP14410 1827 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 SHANK1Q9Y566 2161 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 BPY2O14599 106 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 WFDC12Q8WWY7 111 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 C17orf77Q96MU5 243 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 PKDREJQ9NTG1 2253 aa5.82□□□□□ -1.48
PTPN3-203ENST00000412145 C16orf54Q6UWD8 224 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 PRR20EP86478 221 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 PRR20CP86479 221 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 PRR20DP86480 221 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 PRR20BP86481 221 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 PRR20AP86496 221 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 BPESC1Q9GZL8 116 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
PTPN3-203ENST00000412145 UFSP1Q6NVU6 142 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 K7EMT4 169 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 SPATA12Q7Z6I5 190 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 EFNA2O43921 213 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 NPBQ8NG41 125 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 ODF3Q96PU9 254 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 CTRLP40313 264 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 TMEM131Q92545 1883 aa5.81□□□□□ -1.48
PTPN3-203ENST00000412145 IGKV1-39P01597 117 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 IGKV1D-39P04432 117 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 HOXB4P17483 251 aaPredicted RBP5.8□□□□□ -1.48
PTPN3-203ENST00000412145 BRD3OSQ6XYD6 125 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 PLXNA4Q9HCM2 1894 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 G3V4G9 280 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 IGKV4-1P06312 121 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 CCDC140Q96MF4 163 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
PTPN3-203ENST00000412145 B3GALT5-AS1P59052 145 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 Q6ZRM9 215 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 CACNA1EQ15878 2313 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 HIST2H2BDQ6DRA6 164 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 ZNF524Q96C55 264 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 U3KQE9 123 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 TANC2Q9HCD6 1990 aa5.8□□□□□ -1.48
PTPN3-203ENST00000412145 IGLV3-9A0A075B6K5 115 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 CYYR1Q96J86 154 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 LINC00479Q96M42 142 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 MDFICQ9P1T7 246 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 CLPSP04118 112 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 C3orf22Q8N5N4 141 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 ZNF491Q8N8L2 437 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 IGKV1OR2-108A0A075B7D4 117 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 TRAV26-2A0A0B4J265 109 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 MIAQ16674 131 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 AMTNQ6UX39 209 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 Q8NFD4 153 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 IGHV3-16A0A0C4DH30 117 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 SERP1Q9Y6X1 66 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 DYSFO75923 2080 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 EML5Q05BV3 1969 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 WT1-ASQ06250 92 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 DEFB105AQ8NG35 78 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 TET1Q8NFU7 2136 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 LYNX1G3V0Z9 82 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 LYNX1P0DP58 116 aa5.79□□□□□ -1.48
PTPN3-203ENST00000412145 NOP10Q9NPE3 64 aaKnown RBP5.79□□□□□ -1.48
PTPN3-203ENST00000412145 H0Y9J4 135 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 GYPEP15421 78 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 C15orf65H3BRN8 121 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 IGLV1-44P01699 117 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 C17orf58Q2M2W7 97 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 HCFC1P51610 2035 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 E7EQL1 145 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 SP5Q6BEB4 398 aaPredicted RBP5.78□□□□□ -1.48
PTPN3-203ENST00000412145 CRIPAKQ8N1N5 446 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 DENND4AQ7Z401 1863 aa5.78□□□□□ -1.48
PTPN3-203ENST00000412145 LOXP28300 417 aaPredicted RBP5.78□□□□□ -1.48
PTPN3-203ENST00000412145 A0A0G2JRQ6 117 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 LECT2O14960 151 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 SPRY4Q9C004 299 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 SMIM9A6NGZ8 99 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 FAM222AQ5U5X8 452 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 PINLYPA6NC86 204 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 J3QKU1 62 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 P0DMU3 169 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 FAM231AP0DMU4 169 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 FAM231CP0DMU5 169 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 PRR30Q53SZ7 412 aaPredicted RBP5.77□□□□□ -1.49
PTPN3-203ENST00000412145 COL8A2P25067 703 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 IGKV1-6A0A0C4DH72 117 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 TRAV26-1A0A087WT03 109 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 SPAG11BQ08648 103 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 TMEM263Q8WUH6 116 aaKnown RBP5.77□□□□□ -1.49
PTPN3-203ENST00000412145 FAM110AQ9BQ89 295 aa5.77□□□□□ -1.49
PTPN3-203ENST00000412145 IGKV3D-7A0A0C4DH55 119 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms