RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
TRAPPC12-203ENST00000411973 LY96Q9Y6Y9 160 aa10.84□□□□□ -0.67
TRAPPC12-203ENST00000411973 LCE6AA0A183 80 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 H3BVH4 76 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 K7EN84 100 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 ARMS2P0C7Q2 107 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 CEBPGP53567 150 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 SRSF3P84103 164 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 POM121L12Q8N7R1 296 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 DAZAP1Q96EP5 407 aaKnown RBP10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 SMIM7Q9BQ49 75 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 ALMS1Q8TCU4 4167 aa10.83□□□□□ -0.68
TRAPPC12-203ENST00000411973 TRAV4A0A0B4J268 109 aa10.82□□□□□ -0.68
TRAPPC12-203ENST00000411973 ZNF727A8MUV8 499 aa10.82□□□□□ -0.68
TRAPPC12-203ENST00000411973 C9JQL5 133 aa10.82□□□□□ -0.68
TRAPPC12-203ENST00000411973 MED14OSP0DP75 135 aa10.82□□□□□ -0.68
TRAPPC12-203ENST00000411973 C15orf53Q8NAA6 179 aa10.82□□□□□ -0.68
TRAPPC12-203ENST00000411973 VPS13DQ5THJ4 4388 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 H3BNG1 76 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 P01737 135 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 SLAQ13239 276 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 FHL2Q14192 279 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 FAM74A3Q4VXF1 159 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 NUDT10Q8NFP7 164 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 OR4C5Q8NGB2 326 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 LINC00476Q8WZB0 136 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 NUDT11Q96G61 164 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 ZNF479Q96JC4 524 aa10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC12-203ENST00000411973 TRAV26-1A0A087WT03 109 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 RS1O15537 224 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 CIDEAO60543 219 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 RPS20P60866 119 aaKnown RBP10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
TRAPPC12-203ENST00000411973 SNAI2O43623 268 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 OR5AL1P0C617 328 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 SFTA3P0C7M3 94 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 CFAP126Q5VTH2 177 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 FAM231DQ6ZW35 169 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 PRO0255Q9UI72 69 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 HHLA3Q9XRX5 114 aa10.79□□□□□ -0.68
TRAPPC12-203ENST00000411973 XKRY2A2RUG3 117 aa10.78□□□□□ -0.68
TRAPPC12-203ENST00000411973 A8MWV9 139 aa10.78□□□□□ -0.68
TRAPPC12-203ENST00000411973 NXPH4O95158 308 aa10.78□□□□□ -0.68
TRAPPC12-203ENST00000411973 RYR3Q15413 4870 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 TRGV4A0A0C4DH28 118 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 A0A0J9YY99 117 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 IGLC6P0CF74 106 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 CRYBA4P53673 196 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 TMEM241Q24JQ0 296 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 ZFP2Q6ZN57 461 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
TRAPPC12-203ENST00000411973 RYR2Q92736 4967 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 M0R381 172 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 PAX4O43316 350 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 P0DMU3 169 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 FAM231AP0DMU4 169 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 FAM231CP0DMU5 169 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 GZMBP10144 247 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 SOHLH1Q5JUK2 328 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 RPP21Q9H633 154 aaKnown RBP10.76□□□□□ -0.69
TRAPPC12-203ENST00000411973 LY6G6CO95867 125 aa10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 NUDT3O95989 172 aa10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 GATA1P15976 413 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 SFRP2Q96HF1 295 aa10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 NAT8Q9UHE5 227 aa10.75□□□□□ -0.69
TRAPPC12-203ENST00000411973 A0A1W2PPQ1 181 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 F2Z2F3 143 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 GATCO43716 136 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 RPL23P62829 140 aaKnown RBP10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 CT83Q5H943 113 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 UFSP1Q6NVU6 142 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 JPT2Q9H910 190 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 OSTCQ9NRP0 149 aa10.74□□□□□ -0.69
TRAPPC12-203ENST00000411973 TRBV6-4A0A1B0GX49 114 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 RHODO00212 210 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 RNF212Q495C1 297 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 ISOC2Q96AB3 205 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 SAMD10Q9BYL1 202 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 HYDINQ4G0P3 5121 aa10.73□□□□□ -0.69
TRAPPC12-203ENST00000411973 A0A096LPF7 62 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 CRYGDP07320 174 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 CTRLP40313 264 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 CACNG7P62955 275 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
TRAPPC12-203ENST00000411973 TPPP3Q9BW30 176 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms