RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SPINT3P49223 89 aa0.81□□□□□ -2.28
RNU2-28P-201ENST00000410457 C10orf95Q9H7T3 257 aa0.81□□□□□ -2.28
RNU2-28P-201ENST00000410457 COPZ2Q9P299 210 aa0.81□□□□□ -2.28
RNU2-28P-201ENST00000410457 DLEC1Q9Y238 1755 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 CDK12Q9NYV4 1490 aaPredicted RBP0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 AFDNP55196 1824 aaKnown RBP0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 VIRMAQ69YN4 1812 aaKnown RBP0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 SYNJ1O43426 1573 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 MYH13Q9UKX3 1938 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 J3QLW9 94 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 ZNF137PP52743 207 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 KLKP1Q107X0 134 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 ZNF56Q15929 161 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 NDUFA11Q86Y39 141 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 CTAGE3PQ8IX95 158 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 SAR1AQ9NR31 198 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 CPDO75976 1380 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 ZNF469Q96JG9 3925 aaPredicted RBP0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 PLXNA2O75051 1894 aa0.8□□□□□ -2.28
RNU2-28P-201ENST00000410457 CASZ1Q86V15 1759 aa0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 TEX49A0A1B0GTD5 131 aa0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 LINC00694P0DN24 101 aa0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 BLMP54132 1417 aaPredicted RBP0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 PRG4Q92954 1404 aaPredicted RBP0.79□□□□□ -2.28
RNU2-28P-201ENST00000410457 FAM236AA0A1B0GUQ0 79 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 FAM236BA0A1B0GV22 79 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 APOC1P02654 83 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 C6orf52Q5T4I8 152 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 SPATA8Q6RVD6 105 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
RNU2-28P-201ENST00000410457 FXYD1O00168 92 aa0.77□□□□□ -2.29
RNU2-28P-201ENST00000410457 SLC25A6P12236 298 aa0.77□□□□□ -2.29
RNU2-28P-201ENST00000410457 RPL37P61927 97 aaKnown RBP0.77□□□□□ -2.29
RNU2-28P-201ENST00000410457 ERG28Q9UKR5 140 aa0.77□□□□□ -2.29
RNU2-28P-201ENST00000410457 MED13LQ71F56 2210 aa0.77□□□□□ -2.29
RNU2-28P-201ENST00000410457 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 RREB1Q92766 1687 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 ERCC6Q03468 1493 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 LY6G6CO95867 125 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 COX4I1P13073 169 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 PPP1R1CQ8WVI7 109 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 TMEM14BQ9NUH8 114 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 PAIP2BQ9ULR5 123 aaKnown RBP0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 MYH6P13533 1939 aa0.76□□□□□ -2.29
RNU2-28P-201ENST00000410457 S100A12P80511 92 aa0.75□□□□□ -2.29
RNU2-28P-201ENST00000410457 OR2T2Q6IF00 324 aa0.75□□□□□ -2.29
RNU2-28P-201ENST00000410457 TSTD1Q8NFU3 115 aa0.75□□□□□ -2.29
RNU2-28P-201ENST00000410457 BCORL1Q5H9F3 1711 aa0.75□□□□□ -2.29
RNU2-28P-201ENST00000410457 NAV3Q8IVL0 2385 aa0.75□□□□□ -2.29
RNU2-28P-201ENST00000410457 A0A096LNT2 108 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 K7ERU9 68 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 NPFFO15130 113 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 LINC01545Q5VT33 79 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 VSTM2AQ8TAG5 236 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 PFDN5Q99471 154 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 COA4Q9NYJ1 87 aa0.74□□□□□ -2.29
RNU2-28P-201ENST00000410457 PTPRMP28827 1452 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 TRAV12-2A0A075B6T6 113 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 TFF1P04155 84 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 PYYP10082 97 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 RPS25P62851 125 aaKnown RBP0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 TMEM141Q96I45 108 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 LOC285556D6RIA3 1793 aa0.73□□□□□ -2.29
RNU2-28P-201ENST00000410457 APCP25054 2843 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 ADGRB1O14514 1584 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 PITX3O75364 302 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 MIC13Q5XKP0 118 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 SCIMPQ6UWF3 145 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 IFI27L1Q96BM0 104 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 TCEAL4Q96EI5 215 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 TPT1P8Q9HAU6 139 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 BET1LQ9NYM9 111 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 KIF13AQ9H1H9 1805 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 ZNF142P52746 1687 aaPredicted RBP0.72□□□□□ -2.29
RNU2-28P-201ENST00000410457 JMJD1CQ15652 2540 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 TCRBV3S1A0A5B6 114 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 ZNF670-ZNF695F2Z2N8 137 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 M0R129 80 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 ARPC4P59998 168 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 COPZ1P61923 177 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 SPCS2Q15005 226 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 TSKUQ8WUA8 353 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 FAM103A1Q9BTL3 118 aaKnown RBP0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 NDUFA12Q9UI09 145 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 SOGA1O94964 1423 aa0.71□□□□□ -2.3
RNU2-28P-201ENST00000410457 SPINK7P58062 85 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 ELOF1P60002 83 aaKnown RBP0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 RRAS2P62070 204 aaPredicted RBP0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 EMX2Q04743 252 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 Q6ZUT4 128 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 DSCR8Q96T75 97 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 MYO7AQ13402 2215 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
RNU2-28P-201ENST00000410457 AKAP11Q9UKA4 1901 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms