RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 KANTRA0A1W2PQU2 76 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 PAGE4O60829 102 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 TXNDC17Q9BRA2 123 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 DNAH5Q8TE73 4624 aa12.05□□□□□ -0.48
LSM5-204ENST00000409909 A0A1B0GV50 99 aa12.04□□□□□ -0.48
LSM5-204ENST00000409909 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
LSM5-204ENST00000409909 TMUB2Q71RG4 321 aa12.04□□□□□ -0.48
LSM5-204ENST00000409909 KRTAP17-1Q9BYP8 105 aa12.04□□□□□ -0.48
LSM5-204ENST00000409909 HSPG2P98160 4391 aa12.04□□□□□ -0.48
LSM5-204ENST00000409909 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 B4DEV8 164 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 CIDEAO60543 219 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 SH2D1AO60880 128 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 LTAP01374 205 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 UBE2G1P62253 170 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
LSM5-204ENST00000409909 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 M0R036 132 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 S100A4P26447 101 aaKnown RBP12.02□□□□□ -0.49
LSM5-204ENST00000409909 ASIPP42127 132 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 Q6ZSN1 163 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 SH2D6Q7Z4S9 175 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 SPATA12Q7Z6I5 190 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 IL36BQ9NZH7 164 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 LY96Q9Y6Y9 160 aa12.02□□□□□ -0.49
LSM5-204ENST00000409909 TIRAPP58753 221 aa12.01□□□□□ -0.49
LSM5-204ENST00000409909 KRTAP10-2P60368 255 aa12.01□□□□□ -0.49
LSM5-204ENST00000409909 ZNF674Q2M3X9 581 aa12.01□□□□□ -0.49
LSM5-204ENST00000409909 DNLZQ5SXM8 178 aa12.01□□□□□ -0.49
LSM5-204ENST00000409909 JPT2Q9H910 190 aa12.01□□□□□ -0.49
LSM5-204ENST00000409909 APOBP04114 4563 aaKnown RBP12□□□□□ -0.49
LSM5-204ENST00000409909 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
LSM5-204ENST00000409909 H3BVH4 76 aa12□□□□□ -0.49
LSM5-204ENST00000409909 PFDN1O60925 122 aa12□□□□□ -0.49
LSM5-204ENST00000409909 DNAH10OSP0CZ25 163 aa12□□□□□ -0.49
LSM5-204ENST00000409909 AKR1C3P42330 323 aa12□□□□□ -0.49
LSM5-204ENST00000409909 RHOHQ15669 191 aa12□□□□□ -0.49
LSM5-204ENST00000409909 PIK3CD-AS1Q5SR53 167 aa12□□□□□ -0.49
LSM5-204ENST00000409909 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
LSM5-204ENST00000409909 PRADC1Q9BSG0 188 aa12□□□□□ -0.49
LSM5-204ENST00000409909 PARLQ9H300 379 aa12□□□□□ -0.49
LSM5-204ENST00000409909 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 SCO2A0A1W2PP80 73 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 H2AFB1P0C5Y9 115 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 ARMS2P0C7Q2 107 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
LSM5-204ENST00000409909 EIF5AP63241 154 aaKnown RBP11.99□□□□□ -0.49
LSM5-204ENST00000409909 LGALSLQ3ZCW2 172 aaPredicted RBP11.99□□□□□ -0.49
LSM5-204ENST00000409909 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 SAMD10Q9BYL1 202 aa11.99□□□□□ -0.49
LSM5-204ENST00000409909 A8MWV9 139 aa11.98□□□□□ -0.49
LSM5-204ENST00000409909 TPT1P13693 172 aaKnown RBP11.98□□□□□ -0.49
LSM5-204ENST00000409909 EVI2AP22794 236 aa11.98□□□□□ -0.49
LSM5-204ENST00000409909 CCL20P78556 96 aa11.98□□□□□ -0.49
LSM5-204ENST00000409909 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
LSM5-204ENST00000409909 Q9UF83 564 aa11.98□□□□□ -0.49
LSM5-204ENST00000409909 TMSB15BA0A087X1C1 80 aa11.97□□□□□ -0.49
LSM5-204ENST00000409909 K7EP13 123 aa11.97□□□□□ -0.49
LSM5-204ENST00000409909 SCRT2Q9NQ03 307 aa11.97□□□□□ -0.49
LSM5-204ENST00000409909 MSRB1Q9NZV6 116 aa11.97□□□□□ -0.49
LSM5-204ENST00000409909 ABCA13Q86UQ4 5058 aa11.97□□□□□ -0.49
LSM5-204ENST00000409909 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
LSM5-204ENST00000409909 CRYGDP07320 174 aa11.96□□□□□ -0.49
LSM5-204ENST00000409909 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.49
LSM5-204ENST00000409909 MLST8Q9BVC4 326 aa11.96□□□□□ -0.49
LSM5-204ENST00000409909 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
LSM5-204ENST00000409909 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
LSM5-204ENST00000409909 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
LSM5-204ENST00000409909 TRAV1-1A0A0B4J248 108 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 Q6ZNX1 250 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 BAGE2Q86Y30 109 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
LSM5-204ENST00000409909 SYT8Q8NBV8 401 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 PHLDA3Q9Y5J5 127 aa11.94□□□□□ -0.5
LSM5-204ENST00000409909 TRAV8-6A0A0B4J262 113 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 GAGE12JA6NER3 117 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 CDK2AP2O75956 126 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
LSM5-204ENST00000409909 RPL19P84098 196 aaKnown RBP11.93□□□□□ -0.5
LSM5-204ENST00000409909 GAGE1Q13065 139 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 GAGE4Q13068 117 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 GAGE5Q13069 117 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 GAGE13Q4V321 117 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 LELP1Q5T871 98 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 GNG13Q9P2W3 67 aa11.93□□□□□ -0.5
LSM5-204ENST00000409909 A0A087WWL8 130 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms