RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 LTAP01374 205 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 SRIP30626 198 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 ASIPP42127 132 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 LYPD5Q6UWN5 251 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 GNG13Q9P2W3 67 aa12.49□□□□□ -0.41
PTPRN2-204ENST00000404321 RS1O15537 224 aa12.48□□□□□ -0.41
PTPRN2-204ENST00000404321 NXPH4O95158 308 aa12.48□□□□□ -0.41
PTPRN2-204ENST00000404321 CFAP126Q5VTH2 177 aa12.48□□□□□ -0.41
PTPRN2-204ENST00000404321 C6orf223Q8N319 242 aa12.48□□□□□ -0.41
PTPRN2-204ENST00000404321 TRBV6-1A0A0K0K1D8 114 aa12.47□□□□□ -0.41
PTPRN2-204ENST00000404321 H3BVH4 76 aa12.47□□□□□ -0.41
PTPRN2-204ENST00000404321 EIF5AL1Q6IS14 154 aaKnown RBP12.47□□□□□ -0.41
PTPRN2-204ENST00000404321 KRBOX1C9JBD0 128 aa12.46□□□□□ -0.41
PTPRN2-204ENST00000404321 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
PTPRN2-204ENST00000404321 TTC32Q5I0X7 151 aa12.46□□□□□ -0.41
PTPRN2-204ENST00000404321 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
PTPRN2-204ENST00000404321 SIVA1O15304 175 aa12.45□□□□□ -0.42
PTPRN2-204ENST00000404321 RAB5CP51148 216 aa12.45□□□□□ -0.42
PTPRN2-204ENST00000404321 TNP2Q05952 138 aa12.45□□□□□ -0.42
PTPRN2-204ENST00000404321 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
PTPRN2-204ENST00000404321 SLC51BQ86UW2 128 aa12.45□□□□□ -0.42
PTPRN2-204ENST00000404321 SULT1A2P50226 295 aa12.44□□□□□ -0.42
PTPRN2-204ENST00000404321 BAGE2Q86Y30 109 aa12.44□□□□□ -0.42
PTPRN2-204ENST00000404321 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
PTPRN2-204ENST00000404321 SLC25A29Q8N8R3 303 aa12.44□□□□□ -0.42
PTPRN2-204ENST00000404321 JPT2Q9H910 190 aa12.44□□□□□ -0.42
PTPRN2-204ENST00000404321 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 PTH2Q96A98 100 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 MANBALQ9NQG1 85 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 IL36BQ9NZH7 164 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 S100A9P06702 114 aaKnown RBP12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 Q6ZSN1 163 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 ZNF575Q86XF7 245 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 TXNDC17Q9BRA2 123 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 PARLQ9H300 379 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 KIAA1109Q2LD37 5005 aa12.43□□□□□ -0.42
PTPRN2-204ENST00000404321 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 PRR27Q6MZM9 219 aa12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 WFDC10BQ8IUB3 73 aa12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 PRADC1Q9BSG0 188 aa12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 SAMD10Q9BYL1 202 aa12.42□□□□□ -0.42
PTPRN2-204ENST00000404321 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
PTPRN2-204ENST00000404321 TEX46H3BTG2 121 aa12.41□□□□□ -0.42
PTPRN2-204ENST00000404321 M0R381 172 aa12.41□□□□□ -0.42
PTPRN2-204ENST00000404321 RHOHQ15669 191 aa12.41□□□□□ -0.42
PTPRN2-204ENST00000404321 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 TRBV6-4A0A1B0GX49 114 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 A8MWV9 139 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 MGST1P10620 155 aaKnown RBP12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 LINC00315P59091 139 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 DNLZQ5SXM8 178 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 MLST8Q9BVC4 326 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 PHLDA3Q9Y5J5 127 aa12.4□□□□□ -0.42
PTPRN2-204ENST00000404321 DYNC1H1Q14204 4646 aaKnown RBP12.39□□□□□ -0.43
PTPRN2-204ENST00000404321 PKD1P98161 4303 aa12.39□□□□□ -0.43
PTPRN2-204ENST00000404321 CIDEAO60543 219 aa12.39□□□□□ -0.43
PTPRN2-204ENST00000404321 C11orf52Q96A22 123 aa12.39□□□□□ -0.43
PTPRN2-204ENST00000404321 HERC2O95714 4834 aa12.39□□□□□ -0.43
PTPRN2-204ENST00000404321 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 A0A087WWL8 130 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 CENPWQ5EE01 88 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
PTPRN2-204ENST00000404321 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 IFNA1P01562 189 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 Q9UF83 564 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
PTPRN2-204ENST00000404321 MUC21A0A0G2JKD1 596 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 MUC21A0A140T8X8 626 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 GAGE12JA6NER3 117 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 BCL2P10415 239 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 GAGE1Q13065 139 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 GAGE4Q13068 117 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 GAGE5Q13069 117 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 GAGE13Q4V321 117 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 UFSP1Q6NVU6 142 aa12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 C14orf178Q8N769 122 aaPredicted RBP12.36□□□□□ -0.43
PTPRN2-204ENST00000404321 SSTP61278 116 aa12.35□□□□□ -0.43
PTPRN2-204ENST00000404321 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
PTPRN2-204ENST00000404321 MED9Q9NWA0 146 aa12.35□□□□□ -0.43
PTPRN2-204ENST00000404321 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
PTPRN2-204ENST00000404321 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
PTPRN2-204ENST00000404321 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
PTPRN2-204ENST00000404321 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms