RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
PTPN6-202ENST00000399448 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 Q6YL49 198 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 VPS13CQ709C8 3753 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 H3BRM9 83 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 FSHBP01225 129 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 PRB1P04280 392 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 ELANEP08246 267 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 AMMECR1LQ6DCA0 310 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 KIF25-AS1Q9Y6Z4 181 aa10.25□□□□□ -0.77
PTPN6-202ENST00000399448 RNF223E7ERA6 249 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 K7EQG2 157 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 LGALS9O00182 355 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 LGALS1P09382 135 aaKnown RBP10.24□□□□□ -0.77
PTPN6-202ENST00000399448 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 HLA-DRB4P13762 266 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
PTPN6-202ENST00000399448 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 HLA-DRB4X5D2U9 266 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 TRAV12-3A0A0B4J271 114 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 PLNP26678 52 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 LINC00315P59091 139 aa10.24□□□□□ -0.77
PTPN6-202ENST00000399448 IGSF10Q6WRI0 2623 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 USP9XQ93008 2570 aaPredicted RBP10.23□□□□□ -0.77
PTPN6-202ENST00000399448 A0A0J9YX75 114 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 H7C1H1 209 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 IGHV4-31P0DP07 118 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 WFDC12Q8WWY7 111 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 ZNF702PQ9H963 129 aa10.23□□□□□ -0.77
PTPN6-202ENST00000399448 IGHV4OR15-8A0A075B7B6 117 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 A0A087WW49 117 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 CD7P09564 240 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 SYNJ2BPP57105 145 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 COL12A1Q99715 3063 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 F8VRH5 84 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 K7EP13 123 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 CIDEAO60543 219 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 RPL32P62910 135 aaKnown RBP10.22□□□□□ -0.77
PTPN6-202ENST00000399448 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 CSPG4Q6UVK1 2322 aa10.22□□□□□ -0.77
PTPN6-202ENST00000399448 C9orf118A6NHY6 69 aa10.21□□□□□ -0.77
PTPN6-202ENST00000399448 C2orf66Q6UXQ4 117 aa10.21□□□□□ -0.77
PTPN6-202ENST00000399448 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.77
PTPN6-202ENST00000399448 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.77
PTPN6-202ENST00000399448 CELSR1Q9NYQ6 3014 aa10.21□□□□□ -0.78
PTPN6-202ENST00000399448 RNF152Q8N8N0 203 aa10.21□□□□□ -0.78
PTPN6-202ENST00000399448 BBC3Q96PG8 261 aaPredicted RBP10.21□□□□□ -0.78
PTPN6-202ENST00000399448 TRBV25-1A0A075B6N4 114 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 IGHV3-16A0A0C4DH30 117 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 HOXD3P31249 432 aaPredicted RBP10.2□□□□□ -0.78
PTPN6-202ENST00000399448 C9orf85Q96MD7 179 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 CHAC1Q9BUX1 264 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 MUC4Q99102 2169 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 FLNCQ14315 2725 aa10.2□□□□□ -0.78
PTPN6-202ENST00000399448 HOXA3O43365 443 aaPredicted RBP10.19□□□□□ -0.78
PTPN6-202ENST00000399448 DUSP14O95147 198 aaKnown RBP10.19□□□□□ -0.78
PTPN6-202ENST00000399448 IGKV3-20P01619 116 aa10.19□□□□□ -0.78
PTPN6-202ENST00000399448 BEX4Q9NWD9 120 aaPredicted RBP10.19□□□□□ -0.78
PTPN6-202ENST00000399448 CDKN1BP46527 198 aa10.19□□□□□ -0.78
PTPN6-202ENST00000399448 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
PTPN6-202ENST00000399448 JPT2Q9H910 190 aa10.19□□□□□ -0.78
PTPN6-202ENST00000399448 LINC01549A6NIU2 74 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
PTPN6-202ENST00000399448 ZNF843Q8N446 348 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 BAALCQ8WXS3 180 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 DUX5Q96PT3 197 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 TRAV12-2A0A075B6T6 113 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 A0A087WWL8 130 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 VCYO14598 125 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 KRTAP10-9P60411 292 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 DEFB113Q30KQ7 82 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 MDFICQ9P1T7 246 aa10.18□□□□□ -0.78
PTPN6-202ENST00000399448 IGHV1OR15-1A0A075B7D0 117 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 F5H697 171 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 GCSHP23434 173 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 FOXI2Q6ZQN5 318 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 LRRC75A-AS1Q8N1F1 130 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 CYSLTR1Q9Y271 337 aa10.17□□□□□ -0.78
PTPN6-202ENST00000399448 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 H3BUT2 72 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 SMIM13P0DJ93 91 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 SPINK13Q1W4C9 94 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 Q8N1Y9 231 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
PTPN6-202ENST00000399448 ACACBO00763 2458 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 Q5PR19 223 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 GTF2H5Q6ZYL4 71 aa10.16□□□□□ -0.78
PTPN6-202ENST00000399448 TM2D2Q9BX73 214 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms