RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 IGLV4-69A0A075B6H9 119 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 A0A0J9YY99 117 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 C11orf86A6NJI1 115 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
EWSR1-206ENST00000397938 MED14OSP0DP75 135 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 Q6ZUT4 128 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 CARD19Q96LW7 228 aa13.13□□□□□ -0.31
EWSR1-206ENST00000397938 PPP1R17O96001 155 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 XGP55808 180 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 GPHB5Q86YW7 130 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 SIRPDQ9H106 197 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
EWSR1-206ENST00000397938 ABCA4P78363 2273 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 LINC01548A6NM66 108 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
EWSR1-206ENST00000397938 HERVK_113P61574 105 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 ANXA2RQ3ZCQ2 193 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 Q5PR19 223 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 WFDC12Q8WWY7 111 aa13.12□□□□□ -0.31
EWSR1-206ENST00000397938 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 TCL1BO95988 128 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 TSHBP01222 138 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 AJUBAQ96IF1 538 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
EWSR1-206ENST00000397938 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
EWSR1-206ENST00000397938 OR10J6PQ8NGY7 276 aa13.1□□□□□ -0.31
EWSR1-206ENST00000397938 TRBV20-1A0A075B6N2 111 aa13.1□□□□□ -0.31
EWSR1-206ENST00000397938 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
EWSR1-206ENST00000397938 OVOL1O14753 267 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 C11orf71Q6IPW1 123 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 SVIPQ8NHG7 77 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 VCX2Q9H322 139 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 IGIPA6NJ69 53 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 IGHV3-30P01768 117 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 IGHV3-30-5P0DP03 117 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 EMP1P54849 157 aa13.09□□□□□ -0.31
EWSR1-206ENST00000397938 CFC1BP0CG36 223 aa13.08□□□□□ -0.31
EWSR1-206ENST00000397938 CFC1P0CG37 223 aa13.08□□□□□ -0.31
EWSR1-206ENST00000397938 RNASE3P12724 160 aaKnown RBP13.08□□□□□ -0.31
EWSR1-206ENST00000397938 RPL32P62910 135 aaKnown RBP13.08□□□□□ -0.31
EWSR1-206ENST00000397938 PMVKQ15126 192 aa13.08□□□□□ -0.31
EWSR1-206ENST00000397938 Q6ZS46 218 aa13.08□□□□□ -0.31
EWSR1-206ENST00000397938 A8MWV9 139 aa13.08□□□□□ -0.32
EWSR1-206ENST00000397938 TSPEAR-AS2P59090 65 aa13.08□□□□□ -0.32
EWSR1-206ENST00000397938 C10orf126Q8N4M7 172 aa13.08□□□□□ -0.32
EWSR1-206ENST00000397938 FAM19A4Q96LR4 140 aa13.08□□□□□ -0.32
EWSR1-206ENST00000397938 SOCS3O14543 225 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 GNRH2O43555 120 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 NXPH4O95158 308 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 UBE2E1P51965 193 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 DEFB1P60022 68 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 SLC25A29Q8N8R3 303 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 GVINP1Q7Z2Y8 2422 aa13.07□□□□□ -0.32
EWSR1-206ENST00000397938 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 KIF25-AS1Q9Y6Z4 181 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 IGHV4OR15-8A0A075B7B6 117 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 A0A087WW49 117 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
EWSR1-206ENST00000397938 SAA4P35542 130 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 LINC00315P59091 139 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 TMEM141Q96I45 108 aa13.06□□□□□ -0.32
EWSR1-206ENST00000397938 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
EWSR1-206ENST00000397938 AMELXQ99217 191 aa13.05□□□□□ -0.32
EWSR1-206ENST00000397938 POLR2KP53803 58 aaKnown RBP13.05□□□□□ -0.32
EWSR1-206ENST00000397938 C5orf56Q8N8D9 126 aa13.05□□□□□ -0.32
EWSR1-206ENST00000397938 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
EWSR1-206ENST00000397938 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 PRO1854Q9UHT4 67 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 MUC4Q99102 2169 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 FAM223BA6NKX1 122 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 TGFAP01135 160 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 ARL3P36405 182 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
EWSR1-206ENST00000397938 FAM223AQ8IWN6 122 aa13.04□□□□□ -0.32
EWSR1-206ENST00000397938 TMEM170BQ5T4T1 132 aa13.03□□□□□ -0.32
EWSR1-206ENST00000397938 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
EWSR1-206ENST00000397938 ERG28Q9UKR5 140 aa13.03□□□□□ -0.32
EWSR1-206ENST00000397938 F6UB75 175 aa13.02□□□□□ -0.32
EWSR1-206ENST00000397938 ZNF876PQ49A33 203 aa13.02□□□□□ -0.32
EWSR1-206ENST00000397938 C19orf54Q5BKX5 351 aa13.02□□□□□ -0.32
EWSR1-206ENST00000397938 SUMO4Q6EEV6 95 aa13.02□□□□□ -0.32
EWSR1-206ENST00000397938 KIR2DL4Q99706 377 aa13.02□□□□□ -0.32
EWSR1-206ENST00000397938 TRAV41A0A0B4J266 112 aa13.02□□□□□ -0.33
EWSR1-206ENST00000397938 SCGB1C2P0DMR2 95 aa13.02□□□□□ -0.33
EWSR1-206ENST00000397938 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.33
EWSR1-206ENST00000397938 TRBV7-9A0A0J9YWB2 115 aa13.01□□□□□ -0.33
EWSR1-206ENST00000397938 J3QQQ9 107 aa13.01□□□□□ -0.33
EWSR1-206ENST00000397938 VCYO14598 125 aa13.01□□□□□ -0.33
EWSR1-206ENST00000397938 CDSNQ15517 529 aa13.01□□□□□ -0.33
EWSR1-206ENST00000397938 HRNRQ86YZ3 2850 aaPredicted RBP13.01□□□□□ -0.33
EWSR1-206ENST00000397938 TMEM262E9PQX1 116 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 NDUFA4O00483 81 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 TRBV12-3P01733 135 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 RNF183Q96D59 192 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 LGALS3P17931 250 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms