RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 C15orf32Q32M92 178 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 TTC32Q5I0X7 151 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 H7C1H1 209 aa12.24□□□□□ -0.45
CHMP1A-201ENST00000397901 SFTA2Q6UW10 78 aa12.24□□□□□ -0.45
CHMP1A-201ENST00000397901 Q8N6K4 173 aa12.24□□□□□ -0.45
CHMP1A-201ENST00000397901 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
CHMP1A-201ENST00000397901 CENPVL3A0A0U1RRI6 287 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 F8VRH5 84 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 TCL1BO95988 128 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 SRSF2Q01130 221 aaKnown RBP12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 LAGE3Q14657 143 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 C11orf21Q9P2W6 132 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 TRAV12-1A0A0B4J245 112 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 TRAV26-2A0A0B4J265 109 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 IGKV3D-20A0A0C4DH25 116 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 BRI3O95415 125 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 Q6Q795 121 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 AJUBAQ96IF1 538 aa12.23□□□□□ -0.45
CHMP1A-201ENST00000397901 H3BVH4 76 aa12.22□□□□□ -0.45
CHMP1A-201ENST00000397901 ARL3P36405 182 aa12.22□□□□□ -0.45
CHMP1A-201ENST00000397901 BUB3O43684 328 aa12.22□□□□□ -0.45
CHMP1A-201ENST00000397901 Q6ZQT7 251 aa12.21□□□□□ -0.45
CHMP1A-201ENST00000397901 AGPAT4-IT1Q9H0P7 198 aa12.21□□□□□ -0.45
CHMP1A-201ENST00000397901 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
CHMP1A-201ENST00000397901 Q8N9W7 124 aa12.21□□□□□ -0.45
CHMP1A-201ENST00000397901 M0QXV9 152 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 ZFP36P26651 326 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 HIF1ANQ9NWT6 349 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 CD7P09564 240 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 SCGB1C2P0DMR2 95 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 C11orf71Q6IPW1 123 aa12.2□□□□□ -0.46
CHMP1A-201ENST00000397901 TRAV4A0A0B4J268 109 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 NDUFA11Q86Y39 141 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 TRAV8-2A0A0B4J237 113 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 CLPSL1A2RUU4 121 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 EBI3Q14213 229 aa12.19□□□□□ -0.46
CHMP1A-201ENST00000397901 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
CHMP1A-201ENST00000397901 G3V318 75 aa12.18□□□□□ -0.46
CHMP1A-201ENST00000397901 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
CHMP1A-201ENST00000397901 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
CHMP1A-201ENST00000397901 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
CHMP1A-201ENST00000397901 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 EFNA4P52798 201 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 MINOS1Q5TGZ0 78 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 NRACQ8N912 160 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 MINOS1-NBL1R4GNA1 71 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 SPTBN1Q01082 2364 aaKnown RBP12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 NCOR2Q9Y618 2525 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 IGHV7-4-1A0A0J9YVY3 117 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 OOSP1A8MZH6 123 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
CHMP1A-201ENST00000397901 COL6A6A6NMZ7 2263 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 J3KRW8 73 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 SLC25A20O43772 301 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 CRLF1O75462 422 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 SPANXN1Q5VSR9 72 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 LY6DQ14210 128 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 PLEKHB2Q96CS7 222 aa12.16□□□□□ -0.46
CHMP1A-201ENST00000397901 SPRY2O43597 315 aa12.15□□□□□ -0.46
CHMP1A-201ENST00000397901 PRORYQ9H606 182 aa12.15□□□□□ -0.46
CHMP1A-201ENST00000397901 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
CHMP1A-201ENST00000397901 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
CHMP1A-201ENST00000397901 METTL26Q96S19 204 aa12.14□□□□□ -0.47
CHMP1A-201ENST00000397901 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
CHMP1A-201ENST00000397901 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
CHMP1A-201ENST00000397901 TGFAP01135 160 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 COX6B1P14854 86 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 MEIG1Q5JSS6 88 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 PRR9Q5T870 116 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 OR10J6PQ8NGY7 276 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 SCGB3A1Q96QR1 104 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 SIRPDQ9H106 197 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 AKAP6Q13023 2319 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 SLC25A16P16260 332 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
CHMP1A-201ENST00000397901 C9JAW5 83 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 IGF1P05019 195 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 CFC1BP0CG36 223 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 CFC1P0CG37 223 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 SAA4P35542 130 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 TMEM126AQ9H061 195 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
CHMP1A-201ENST00000397901 TOMM6Q96B49 74 aa12.11□□□□□ -0.47
CHMP1A-201ENST00000397901 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
CHMP1A-201ENST00000397901 VPREB3Q9UKI3 123 aa12.11□□□□□ -0.47
CHMP1A-201ENST00000397901 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms