RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 IGHV4-38-2P0DP08 117 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 PRNTQ86SH4 94 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 LINC00479Q96M42 142 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 TIMM17AQ99595 171 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
PTPRD-206ENST00000397617 RNF114Q9Y508 228 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 PDZD2O15018 2839 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 NIT1Q86X76 327 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 ATOH7Q8N100 152 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 C18orf15Q96N68 181 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 SH2D1AO60880 128 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 SLC25A20O43772 301 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 PF4P02776 101 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 CKS2P33552 79 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 ZFP2Q6ZN57 461 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 Q8N8P6 123 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 TIMM21Q9BVV7 248 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 PKIGQ9Y2B9 76 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 TRBV27A0A0K0K1C4 114 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 SIGMAR1Q99720 223 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 CITED1Q99966 193 aa4.44□□□□□ -1.7
PTPRD-206ENST00000397617 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 DNAJC30Q96LL9 226 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 CD33P20138 364 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 SUMO2P61956 95 aaKnown RBP4.43□□□□□ -1.7
PTPRD-206ENST00000397617 ZNF702PQ9H963 129 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 TRAV8-2A0A0B4J237 113 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 ARMS2P0C7Q2 107 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 FAM159AQ6UWV7 190 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 SMAD5-AS1Q9Y6J3 95 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 CAMPP49913 170 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 RNF183Q96D59 192 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 BLCAPP62952 87 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 C9orf85Q96MD7 179 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 TAL2Q16559 108 aa4.43□□□□□ -1.7
PTPRD-206ENST00000397617 CHTOPQ9Y3Y2 248 aaKnown RBP4.43□□□□□ -1.7
PTPRD-206ENST00000397617 HOXD3P31249 432 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-206ENST00000397617 PLNP26678 52 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 GNG5P63218 68 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 LINC00322Q6ZN03 302 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-206ENST00000397617 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 PRSS2P07478 247 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 IGLC3P0DOY3 106 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 CRIP1P50238 77 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 NCR2O95944 276 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 LYZL1Q6UWQ5 148 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 VCYO14598 125 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 AMTNQ6UX39 209 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 KRTAP1-3Q8IUG1 177 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 TSSC4Q9Y5U2 329 aaPredicted RBP4.42□□□□□ -1.7
PTPRD-206ENST00000397617 TENM1Q9UKZ4 2725 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 AVPP01185 164 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 IGHV4-59P01825 116 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 Q6ZWC4 215 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 CYSLTR1Q9Y271 337 aa4.42□□□□□ -1.7
PTPRD-206ENST00000397617 RBMY1BA6NDE4 496 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 RBMY1EA6NEQ0 496 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 IGHV3-48P01763 117 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 RBMY1DP0C7P1 496 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 RBMY1A1P0DJD3 496 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 RBMY1CP0DJD4 496 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 LGALS3P17931 250 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 BEAN1Q3B7T3 259 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 SFTA2Q6UW10 78 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 BRD3OSQ6XYD6 125 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 FBN2P35556 2912 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 ZMAT4Q9H898 229 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 OR11H12B2RN74 326 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 PLA2G2AP14555 144 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 RIPPLY3P57055 190 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 OR11H1Q8NG94 326 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 OR11H2Q8NH07 326 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 IFI27L1Q96BM0 104 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 TMEM126AQ9H061 195 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 H3BQ85 93 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 VGLL1Q99990 258 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 C11orf68Q9H3H3 251 aaKnown RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 AURKAIP1Q9NWT8 199 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-206ENST00000397617 KIF25-AS1Q9Y6Z4 181 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 DCHS1Q96JQ0 3298 aa4.41□□□□□ -1.7
PTPRD-206ENST00000397617 IGKV3D-20A0A0C4DH25 116 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 ATP5G1P05496 136 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 CD24P25063 80 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 NSUN5P1Q3KNT7 163 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.7
PTPRD-206ENST00000397617 IGHV1OR15-1A0A075B7D0 117 aa4.4□□□□□ -1.7
PTPRD-206ENST00000397617 SMIM13P0DJ93 91 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms