RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RUSC1-AS1Q66K80 236 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 ORMDL3Q8N138 153 aa4.1□□□□□ -1.75
VPS41-203ENST00000395969 PIEZO2Q9H5I5 2752 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 C10orf55Q5SWW7 151 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 TMEM158Q8WZ71 300 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 C16orf95Q9H693 158 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 C21orf62Q9NYP8 219 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.09□□□□□ -1.755e-8■■■■□ 26.3
VPS41-203ENST00000395969 PKDREJQ9NTG1 2253 aa4.09□□□□□ -1.75
VPS41-203ENST00000395969 TRBV7-3A0A075B6L6 115 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 IGHV4-4A0A075B6R2 117 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 TRAV8-1A0A0A6YYK1 113 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 IGKCP01834 107 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 NHLRC4P0CG21 123 aaPredicted RBP4.09□□□□□ -1.76
VPS41-203ENST00000395969 MED14OSP0DP75 135 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 PLA2G2AP14555 144 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 PSMB8P28062 276 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 PSMB2P49721 201 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 CRIP1P50238 77 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 MRPL51Q4U2R6 128 aaKnown RBP4.09□□□□□ -1.76
VPS41-203ENST00000395969 ZFAND6Q6FIF0 208 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 MORN3Q6PF18 240 aaPredicted RBP4.09□□□□□ -1.76
VPS41-203ENST00000395969 GPHB5Q86YW7 130 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 EEF1AKMT3Q96AZ1 226 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 RASL11BQ9BPW5 248 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 SLC50A1Q9BRV3 221 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 TACC2O95359 2948 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 MALRD1Q5VYJ5 2156 aa4.09□□□□□ -1.76
VPS41-203ENST00000395969 RPL7P18124 248 aaKnown RBP4.08□□□□□ -1.76
VPS41-203ENST00000395969 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 FAM159AQ6UWV7 190 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 POM121L12Q8N7R1 296 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 PLA2G2DQ9UNK4 145 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 X6R8D5 127 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 BUB3O43684 328 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 NPYP01303 97 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 COX7A1P24310 79 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 MAPKAPK5-AS1Q8N8E1 139 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 CARD19Q96LW7 228 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 LINC00467Q9BRT7 94 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 SRD5A1P18405 259 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 C9orf47Q6ZRZ4 202 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 SBSPONQ8IVN8 264 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 DMXL2Q8TDJ6 3036 aa4.08□□□□□ -1.76
VPS41-203ENST00000395969 SMG1Q96Q15 3661 aaKnown RBP4.07□□□□□ -1.76
VPS41-203ENST00000395969 TRAV41A0A0B4J266 112 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 TMEM213A2RRL7 107 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE12JA6NER3 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE7O76087 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 DPM2O94777 84 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ELANEP08246 267 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ORM2P19652 201 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GAGE4Q13068 117 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 LCE2CQ5TA81 110 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ZC2HC1BQ5TFG8 222 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 GOLT1AQ6ZVE7 132 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ZNF575Q86XF7 245 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 NOTCH3Q9UM47 2321 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ATP6V0E1O15342 81 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ATP5LO75964 103 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 LY6HO94772 140 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 KRTAP1-1Q07627 177 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 TWIST1Q15672 202 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 MEIG1Q5JSS6 88 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 LYZL1Q6UWQ5 148 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 PPDPFLQ8WWR9 84 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 DLX4Q92988 240 aaPredicted RBP4.07□□□□□ -1.76
VPS41-203ENST00000395969 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 TNFRSF18Q9Y5U5 241 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 SMAD5-AS1Q9Y6J3 95 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 ABCA2Q9BZC7 2435 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 RELNP78509 3460 aa4.07□□□□□ -1.76
VPS41-203ENST00000395969 SMKR1H3BMG3 65 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 H7C2G1 150 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 PRSS1P07477 247 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 TEN1Q86WV5 123 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 Q8N1Y9 231 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 VPREB3Q9UKI3 123 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 RHODO00212 210 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 UBE2D3P61077 147 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 UBE2D2P62837 147 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 PIK3CD-AS1Q5SR53 167 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 Q6ZQT7 251 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 EXOC3-AS1Q8N2X6 119 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 RNF185Q96GF1 192 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 EDA2RQ9HAV5 297 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 CNOT1A5YKK6 2376 aaKnown RBP4.06□□□□□ -1.76
VPS41-203ENST00000395969 ZFHX2Q9C0A1 2572 aaPredicted RBP4.06□□□□□ -1.76
VPS41-203ENST00000395969 TRAV8-2A0A0B4J237 113 aa4.06□□□□□ -1.76
VPS41-203ENST00000395969 FAM229AH3BQW9 127 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms