RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 HIST1H2BNQ99877 126 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 HIST1H2BMQ99879 126 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 LAMA1P25391 3075 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 ZNF503Q96F45 646 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 K7EQG2 157 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 OR5A1Q8NGJ0 315 aa14.68□□□□□ -0.06
CXXC4-201ENST00000394767 CRXO43186 299 aaPredicted RBP14.67□□□□□ -0.06
CXXC4-201ENST00000394767 A0A096LPF7 62 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 PAX4O43316 350 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 SCGB1C2P0DMR2 95 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 FAM104BQ5XKR9 115 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 DEFB4AO15263 64 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 TNFRSF6BO95407 300 aa14.67□□□□□ -0.06
CXXC4-201ENST00000394767 A0A0J9YY99 117 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 SPART-AS1P0CW21 52 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 C16orf74Q96GX8 76 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 TRAV26-2A0A0B4J265 109 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 HLA-DRB4P13762 266 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 HLA-DRB4X5D2U9 266 aa14.66□□□□□ -0.06
CXXC4-201ENST00000394767 TRAV8-6A0A0B4J262 113 aa14.65□□□□□ -0.06
CXXC4-201ENST00000394767 CIRBPQ14011 172 aaKnown RBP14.65□□□□□ -0.06
CXXC4-201ENST00000394767 PMCHL2Q9BQD1 86 aa14.65□□□□□ -0.06
CXXC4-201ENST00000394767 CHCHD1Q96BP2 118 aaKnown RBP14.65□□□□□ -0.06
CXXC4-201ENST00000394767 IGHV3-38A0A0C4DH36 116 aa14.64□□□□□ -0.07
CXXC4-201ENST00000394767 CFAP161Q6P656 301 aa14.64□□□□□ -0.07
CXXC4-201ENST00000394767 COL27A1Q8IZC6 1860 aaPredicted RBP14.64□□□□□ -0.07
CXXC4-201ENST00000394767 A8MWP6 167 aa14.64□□□□□ -0.07
CXXC4-201ENST00000394767 SMIM6P0DI80 62 aa14.64□□□□□ -0.07
CXXC4-201ENST00000394767 ESM1Q9NQ30 184 aa14.64□□□□□ -0.07
CXXC4-201ENST00000394767 SPATA45Q537H7 98 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 Q8N1Y9 231 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 SMIM27A0A1W2PRY6 76 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 IFI27L1Q96BM0 104 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 SLAQ13239 276 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 LINC00482Q8N8I6 264 aa14.63□□□□□ -0.07
CXXC4-201ENST00000394767 SDHAF1A6NFY7 115 aa14.62□□□□□ -0.07
CXXC4-201ENST00000394767 LINC01549A6NIU2 74 aa14.62□□□□□ -0.07
CXXC4-201ENST00000394767 ADAMTSL5Q6ZMM2 481 aa14.62□□□□□ -0.07
CXXC4-201ENST00000394767 LAMTOR2Q9Y2Q5 125 aa14.62□□□□□ -0.07
CXXC4-201ENST00000394767 PSCAO43653 123 aa14.61□□□□□ -0.07
CXXC4-201ENST00000394767 MRPL51Q4U2R6 128 aaKnown RBP14.61□□□□□ -0.07
CXXC4-201ENST00000394767 ZNF124Q15973 351 aa14.61□□□□□ -0.07
CXXC4-201ENST00000394767 HOXA5P20719 270 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 DMRTA1Q5VZB9 504 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 NDUFS6O75380 124 aaKnown RBP14.6□□□□□ -0.07
CXXC4-201ENST00000394767 KLF12Q9Y4X4 402 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 TRBV25-1A0A075B6N4 114 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 H3BMM0 161 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 TYMSP04818 313 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 OXLD1Q5BKU9 147 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 CRIP2P52943 208 aaPredicted RBP14.6□□□□□ -0.07
CXXC4-201ENST00000394767 C16orf95Q9H693 158 aa14.6□□□□□ -0.07
CXXC4-201ENST00000394767 SPTBN5Q9NRC6 3674 aaKnown RBP14.6□□□□□ -0.07
CXXC4-201ENST00000394767 M0R143 59 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 RHOHQ15669 191 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 LINC00469Q8N7U9 141 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 ATP5G1P05496 136 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 TRAV13-1A0A0B4J241 112 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 TEX43Q6ZNM6 134 aa14.59□□□□□ -0.07
CXXC4-201ENST00000394767 PSMB2P49721 201 aa14.58□□□□□ -0.08
CXXC4-201ENST00000394767 NEGR1Q7Z3B1 354 aa14.58□□□□□ -0.08
CXXC4-201ENST00000394767 TEX48A0A1B0GUV7 120 aa14.58□□□□□ -0.08
CXXC4-201ENST00000394767 C20orf173Q96LM9 149 aa14.58□□□□□ -0.08
CXXC4-201ENST00000394767 CHTOPQ9Y3Y2 248 aaKnown RBP14.58□□□□□ -0.08
CXXC4-201ENST00000394767 I3L3M4 83 aa14.58□□□□□ -0.08
CXXC4-201ENST00000394767 LINC01559Q495D7 138 aa14.57□□□□□ -0.08
CXXC4-201ENST00000394767 SLC25A34Q6PIV7 304 aa14.56□□□□□ -0.08
CXXC4-201ENST00000394767 HIST1H4GQ99525 98 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 REV3LO60673 3130 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 VAMP3Q15836 100 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 DPM2O94777 84 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 GCSHP23434 173 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 GAGE6Q13070 117 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 TMEM243Q9BU79 118 aa14.55□□□□□ -0.08
CXXC4-201ENST00000394767 C10orf91Q5T1B1 145 aa14.54□□□□□ -0.08
CXXC4-201ENST00000394767 MSRB1Q9NZV6 116 aa14.54□□□□□ -0.08
CXXC4-201ENST00000394767 IGSF10Q6WRI0 2623 aa14.54□□□□□ -0.08
CXXC4-201ENST00000394767 IGHV3-64A0A075B6Q5 118 aa14.54□□□□□ -0.08
CXXC4-201ENST00000394767 TRAV2A0A0B4J234 112 aa14.54□□□□□ -0.08
CXXC4-201ENST00000394767 WFDC10AQ9H1F0 79 aa14.53□□□□□ -0.08
CXXC4-201ENST00000394767 MDFICQ9P1T7 246 aa14.53□□□□□ -0.08
CXXC4-201ENST00000394767 PRB2P02812 416 aaPredicted RBP14.53□□□□□ -0.08
CXXC4-201ENST00000394767 UBE2CO00762 179 aa14.53□□□□□ -0.08
CXXC4-201ENST00000394767 TP53TG1Q9Y2A0 90 aa14.52□□□□□ -0.08
CXXC4-201ENST00000394767 ITPR3Q14573 2671 aa14.52□□□□□ -0.08
CXXC4-201ENST00000394767 GDF5OSQ5U4N7 250 aa14.52□□□□□ -0.09
CXXC4-201ENST00000394767 TMEM263Q8WUH6 116 aaKnown RBP14.52□□□□□ -0.09
CXXC4-201ENST00000394767 FLNAP21333 2647 aaKnown RBP14.52□□□□□ -0.09
CXXC4-201ENST00000394767 NPYP01303 97 aa14.52□□□□□ -0.09
CXXC4-201ENST00000394767 ZNF580Q9UK33 172 aa14.52□□□□□ -0.09
CXXC4-201ENST00000394767 GYPEP15421 78 aa14.52□□□□□ -0.09
CXXC4-201ENST00000394767 SNAI2O43623 268 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 PROK1P58294 105 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 RAB37Q96AX2 223 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 C11orf68Q9H3H3 251 aaKnown RBP14.51□□□□□ -0.09
CXXC4-201ENST00000394767 H7C2G1 150 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 EDN2P20800 178 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 SS18Q15532 418 aa14.51□□□□□ -0.09
CXXC4-201ENST00000394767 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms