RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 M0R036 132 aa21.11■□□□□ 0.97
CMTM4-202ENST00000394106 RS1O15537 224 aa21.11■□□□□ 0.97
CMTM4-202ENST00000394106 LTAP01374 205 aa21.11■□□□□ 0.97
CMTM4-202ENST00000394106 FAM162BQ5T6X4 162 aa21.11■□□□□ 0.97
CMTM4-202ENST00000394106 COX8CQ7Z4L0 72 aa21.11■□□□□ 0.97
CMTM4-202ENST00000394106 IGHV3-73A0A0B4J1V6 119 aa21.1■□□□□ 0.97
CMTM4-202ENST00000394106 LOC100131303A0A0U1RQF7 123 aa21.1■□□□□ 0.97
CMTM4-202ENST00000394106 SCO2A0A1W2PP80 73 aa21.1■□□□□ 0.97
CMTM4-202ENST00000394106 GATA1P15976 413 aaPredicted RBP21.1■□□□□ 0.97
CMTM4-202ENST00000394106 EIF5AL1Q6IS14 154 aaKnown RBP21.1■□□□□ 0.97
CMTM4-202ENST00000394106 PTH2Q96A98 100 aa21.1■□□□□ 0.97
CMTM4-202ENST00000394106 SIVA1O15304 175 aa21.09■□□□□ 0.97
CMTM4-202ENST00000394106 C1QBP02746 253 aa21.09■□□□□ 0.97
CMTM4-202ENST00000394106 NHLRC2Q8NBF2 726 aa21.09■□□□□ 0.97
CMTM4-202ENST00000394106 TXNDC17Q9BRA2 123 aa21.09■□□□□ 0.97
CMTM4-202ENST00000394106 A0A1W2PPQ1 181 aa21.08■□□□□ 0.97
CMTM4-202ENST00000394106 KRBOX1C9JBD0 128 aa21.07■□□□□ 0.96
CMTM4-202ENST00000394106 TNP2Q05952 138 aa21.07■□□□□ 0.96
CMTM4-202ENST00000394106 GRIFINA4D1Z8 144 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 H3BVH4 76 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 S100A9P06702 114 aaKnown RBP21.06■□□□□ 0.96
CMTM4-202ENST00000394106 RAB5CP51148 216 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 CCL20P78556 96 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 ZNF674Q2M3X9 581 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 AKAP14Q86UN6 197 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 GNG13Q9P2W3 67 aa21.06■□□□□ 0.96
CMTM4-202ENST00000394106 CIDEAO60543 219 aa21.05■□□□□ 0.96
CMTM4-202ENST00000394106 SLC25A29Q8N8R3 303 aa21.05■□□□□ 0.96
CMTM4-202ENST00000394106 IL36BQ9NZH7 164 aa21.05■□□□□ 0.96
CMTM4-202ENST00000394106 TMSB15BA0A087X1C1 80 aa21.04■□□□□ 0.96
CMTM4-202ENST00000394106 SULT1A2P50226 295 aa21.03■□□□□ 0.96
CMTM4-202ENST00000394106 PRADC1Q9BSG0 188 aa21.03■□□□□ 0.96
CMTM4-202ENST00000394106 MANBALQ9NQG1 85 aa21.03■□□□□ 0.96
CMTM4-202ENST00000394106 TRAV1-1A0A0B4J248 108 aa21.02■□□□□ 0.96
CMTM4-202ENST00000394106 ARMS2P0C7Q2 107 aa21.02■□□□□ 0.96
CMTM4-202ENST00000394106 SLC51BQ86UW2 128 aa21.02■□□□□ 0.96
CMTM4-202ENST00000394106 TEX46H3BTG2 121 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 RHOHQ15669 191 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 LINC01559Q495D7 138 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 DNLZQ5SXM8 178 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 SH2D6Q7Z4S9 175 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 BAGE2Q86Y30 109 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 PARLQ9H300 379 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 HERC2O95714 4834 aa21.01■□□□□ 0.95
CMTM4-202ENST00000394106 TRBV6-4A0A1B0GX49 114 aa21■□□□□ 0.95
CMTM4-202ENST00000394106 A8MWV9 139 aa21■□□□□ 0.95
CMTM4-202ENST00000394106 PIK3CD-AS1Q5SR53 167 aa20.99■□□□□ 0.95
CMTM4-202ENST00000394106 WFDC10BQ8IUB3 73 aa20.99■□□□□ 0.95
CMTM4-202ENST00000394106 SYT8Q8NBV8 401 aa20.99■□□□□ 0.95
CMTM4-202ENST00000394106 JPT2Q9H910 190 aa20.99■□□□□ 0.95
CMTM4-202ENST00000394106 MGST1P10620 155 aaKnown RBP20.98■□□□□ 0.95
CMTM4-202ENST00000394106 DMRTA1Q5VZB9 504 aa20.98■□□□□ 0.95
CMTM4-202ENST00000394106 PKD1P98161 4303 aa20.98■□□□□ 0.95
CMTM4-202ENST00000394106 LINC00315P59091 139 aa20.97■□□□□ 0.95
CMTM4-202ENST00000394106 ZNF575Q86XF7 245 aa20.97■□□□□ 0.95
CMTM4-202ENST00000394106 PHLDA3Q9Y5J5 127 aa20.97■□□□□ 0.95
CMTM4-202ENST00000394106 LY96Q9Y6Y9 160 aa20.97■□□□□ 0.95
CMTM4-202ENST00000394106 RPL35P42766 123 aaKnown RBP20.96■□□□□ 0.95
CMTM4-202ENST00000394106 ZFP2Q6ZN57 461 aa20.96■□□□□ 0.95
CMTM4-202ENST00000394106 Q6ZSN1 163 aa20.96■□□□□ 0.95
CMTM4-202ENST00000394106 C9orf62Q8N4C0 152 aa20.96■□□□□ 0.95
CMTM4-202ENST00000394106 MLST8Q9BVC4 326 aa20.96■□□□□ 0.95
CMTM4-202ENST00000394106 BTF3P20290 206 aaKnown RBP20.95■□□□□ 0.94
CMTM4-202ENST00000394106 PRR27Q6MZM9 219 aa20.95■□□□□ 0.94
CMTM4-202ENST00000394106 SAMD10Q9BYL1 202 aa20.95■□□□□ 0.94
CMTM4-202ENST00000394106 M0R381 172 aa20.94■□□□□ 0.94
CMTM4-202ENST00000394106 RPL19P84098 196 aaKnown RBP20.94■□□□□ 0.94
CMTM4-202ENST00000394106 C11orf52Q96A22 123 aa20.94■□□□□ 0.94
CMTM4-202ENST00000394106 DERL1Q9BUN8 251 aa20.94■□□□□ 0.94
CMTM4-202ENST00000394106 SCRT2Q9NQ03 307 aa20.93■□□□□ 0.94
CMTM4-202ENST00000394106 PKHD1P08F94 4074 aa20.93■□□□□ 0.94
CMTM4-202ENST00000394106 TRAV9-2A0A087WT02 112 aa20.92■□□□□ 0.94
CMTM4-202ENST00000394106 TIRAPP58753 221 aa20.92■□□□□ 0.94
CMTM4-202ENST00000394106 IFNA1P01562 189 aa20.91■□□□□ 0.94
CMTM4-202ENST00000394106 EVI2AP22794 236 aa20.91■□□□□ 0.94
CMTM4-202ENST00000394106 FAM74A4Q5TZK3 123 aa20.91■□□□□ 0.94
CMTM4-202ENST00000394106 UFSP1Q6NVU6 142 aa20.91■□□□□ 0.94
CMTM4-202ENST00000394106 ZFP82Q8N141 532 aa20.9■□□□□ 0.94
CMTM4-202ENST00000394106 TNFRSF18Q9Y5U5 241 aa20.9■□□□□ 0.94
CMTM4-202ENST00000394106 A0A087WWL8 130 aa20.89■□□□□ 0.93
CMTM4-202ENST00000394106 RHODO00212 210 aa20.89■□□□□ 0.93
CMTM4-202ENST00000394106 DNAH10OSP0CZ25 163 aa20.89■□□□□ 0.93
CMTM4-202ENST00000394106 MEF2BQ02080 365 aaPredicted RBP20.89■□□□□ 0.93
CMTM4-202ENST00000394106 ATP6V0E2Q8NHE4 81 aa20.89■□□□□ 0.93
CMTM4-202ENST00000394106 SFRP2Q96HF1 295 aa20.89■□□□□ 0.93
CMTM4-202ENST00000394106 GAGE12JA6NER3 117 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 GAGE1Q13065 139 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 GAGE4Q13068 117 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 GAGE5Q13069 117 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 GAGE13Q4V321 117 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 CENPWQ5EE01 88 aa20.88■□□□□ 0.93
CMTM4-202ENST00000394106 C14orf178Q8N769 122 aaPredicted RBP20.88■□□□□ 0.93
CMTM4-202ENST00000394106 BCL2P10415 239 aa20.87■□□□□ 0.93
CMTM4-202ENST00000394106 OR10J3Q5JRS4 329 aa20.87■□□□□ 0.93
CMTM4-202ENST00000394106 TRAV8-6A0A0B4J262 113 aa20.86■□□□□ 0.93
CMTM4-202ENST00000394106 PDE6DO43924 150 aa20.86■□□□□ 0.93
CMTM4-202ENST00000394106 MED14OSP0DP75 135 aa20.86■□□□□ 0.93
CMTM4-202ENST00000394106 Q6ZRN7 208 aaPredicted RBP20.86■□□□□ 0.93
CMTM4-202ENST00000394106 GTSF1LQ9H1H1 148 aa20.86■□□□□ 0.93
CMTM4-202ENST00000394106 KIAA1109Q2LD37 5005 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms