RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 PHLDA3Q9Y5J5 127 aa15.8■□□□□ 0.12
SPHK1-202ENST00000392496 TIMM8BQ9Y5J9 83 aaPredicted RBP15.8■□□□□ 0.12
SPHK1-202ENST00000392496 CDPF1Q6NVV7 123 aa15.78■□□□□ 0.12
SPHK1-202ENST00000392496 SORL1Q92673 2214 aa15.78■□□□□ 0.12
SPHK1-202ENST00000392496 SAP30O75446 220 aa15.77■□□□□ 0.12
SPHK1-202ENST00000392496 EVI2AP22794 236 aa15.77■□□□□ 0.12
SPHK1-202ENST00000392496 CD7P09564 240 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 ZNF124Q15973 351 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 ODF3L2Q3SX64 289 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 OR2K2Q8NGT1 345 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 CLUHP3Q96NS8 147 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 LAMTOR2Q9Y2Q5 125 aa15.77■□□□□ 0.11
SPHK1-202ENST00000392496 IGHV1OR15-1A0A075B7D0 117 aa15.76■□□□□ 0.11
SPHK1-202ENST00000392496 RBMY1BA6NDE4 496 aaKnown RBP15.76■□□□□ 0.11
SPHK1-202ENST00000392496 RBMY1EA6NEQ0 496 aaKnown RBP15.76■□□□□ 0.11
SPHK1-202ENST00000392496 NXPH4O95158 308 aa15.76■□□□□ 0.11
SPHK1-202ENST00000392496 RBMY1DP0C7P1 496 aaKnown RBP15.76■□□□□ 0.11
SPHK1-202ENST00000392496 M0R381 172 aa15.75■□□□□ 0.11
SPHK1-202ENST00000392496 IGLV1-51P01701 117 aa15.75■□□□□ 0.11
SPHK1-202ENST00000392496 CMC4P56277 68 aaPredicted RBP15.75■□□□□ 0.11
SPHK1-202ENST00000392496 SMKR1H3BMG3 65 aa15.75■□□□□ 0.11
SPHK1-202ENST00000392496 CRXO43186 299 aaPredicted RBP15.75■□□□□ 0.11
SPHK1-202ENST00000392496 PRSS3P2Q8NHM4 247 aa15.75■□□□□ 0.11
SPHK1-202ENST00000392496 WNK1Q9H4A3 2382 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 NCR2O95944 276 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 NPYP01303 97 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 RIPPLY3P57055 190 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 FA2HQ7L5A8 372 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 TMEM158Q8WZ71 300 aa15.74■□□□□ 0.11
SPHK1-202ENST00000392496 IGHV3-16A0A0C4DH30 117 aa15.73■□□□□ 0.11
SPHK1-202ENST00000392496 OR11H12B2RN74 326 aa15.73■□□□□ 0.11
SPHK1-202ENST00000392496 SCGB1D1O95968 90 aa15.73■□□□□ 0.11
SPHK1-202ENST00000392496 FXYD7P58549 80 aa15.73■□□□□ 0.11
SPHK1-202ENST00000392496 IGHV1-24A0A0C4DH33 117 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 PCP4L1A6NKN8 68 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 PRIMA1Q86XR5 153 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 C9orf85Q96MD7 179 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 AP5S1Q9NUS5 200 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 C2CD3Q4AC94 2353 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 SPRY2O43597 315 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 PF4P02776 101 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 IFI27P40305 119 aaPredicted RBP15.72■□□□□ 0.11
SPHK1-202ENST00000392496 Q8N1Y9 231 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 DPH3P1Q9H4G8 78 aa15.72■□□□□ 0.11
SPHK1-202ENST00000392496 TRGV11A0A075B6L2 103 aa15.71■□□□□ 0.11
SPHK1-202ENST00000392496 S100A12P80511 92 aa15.71■□□□□ 0.11
SPHK1-202ENST00000392496 MRAP2Q96G30 205 aa15.71■□□□□ 0.11
SPHK1-202ENST00000392496 AP1S3Q96PC3 154 aa15.71■□□□□ 0.11
SPHK1-202ENST00000392496 LOC389332A0A1B0GUA5 103 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 TNFRSF6BO95407 300 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 RBMY1A1P0DJD3 496 aaKnown RBP15.7■□□□□ 0.1
SPHK1-202ENST00000392496 RBMY1CP0DJD4 496 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 KRTDAPP60985 99 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 RBMY1FQ15415 496 aaKnown RBP15.7■□□□□ 0.1
SPHK1-202ENST00000392496 LINC00482Q8N8I6 264 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 MAP1LC3AQ9H492 121 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 GSN-AS1Q9NRJ2 163 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.7■□□□□ 0.1
SPHK1-202ENST00000392496 FAM110AQ9BQ89 295 aa15.7■□□□□ 0.1
SPHK1-202ENST00000392496 GAS8-AS1O95177 125 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 C3orf79P0CE67 100 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 PMCHL1Q16048 86 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 STHQ8IWL8 128 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 C20orf144Q9BQM9 153 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 MDFICQ9P1T7 246 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 MUC4Q99102 2169 aa15.69■□□□□ 0.1
SPHK1-202ENST00000392496 BEAN1Q3B7T3 259 aa15.68■□□□□ 0.1
SPHK1-202ENST00000392496 TRPT1Q86TN4 253 aaKnown RBP15.67■□□□□ 0.1
SPHK1-202ENST00000392496 C14orf178Q8N769 122 aaPredicted RBP15.67■□□□□ 0.1
SPHK1-202ENST00000392496 PRSS47A8MTI9 375 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 LEPROTL1O95214 131 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 GATA1P15976 413 aaPredicted RBP15.67■□□□□ 0.1
SPHK1-202ENST00000392496 DEFB125Q8N687 156 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 POM121L12Q8N7R1 296 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 NRACQ8N912 160 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 SYT8Q8NBV8 401 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 LINC00467Q9BRT7 94 aa15.67■□□□□ 0.1
SPHK1-202ENST00000392496 CBY3A6NI87 242 aa15.66■□□□□ 0.1
SPHK1-202ENST00000392496 KIF25-AS1Q9Y6Z4 181 aa15.66■□□□□ 0.1
SPHK1-202ENST00000392496 ATRQ13535 2644 aa15.66■□□□□ 0.1
SPHK1-202ENST00000392496 LINC01546A6NGU7 62 aa15.65■□□□□ 0.1
SPHK1-202ENST00000392496 INSP01308 110 aa15.65■□□□□ 0.1
SPHK1-202ENST00000392496 Q8N976 141 aa15.65■□□□□ 0.1
SPHK1-202ENST00000392496 NXT2Q9NPJ8 142 aaKnown RBP15.65■□□□□ 0.1
SPHK1-202ENST00000392496 TRAV26-2A0A0B4J265 109 aa15.64■□□□□ 0.1
SPHK1-202ENST00000392496 KRTAP24-1Q3LI83 254 aa15.64■□□□□ 0.1
SPHK1-202ENST00000392496 SMIM17P0DL12 118 aa15.64■□□□□ 0.09
SPHK1-202ENST00000392496 BTF3P20290 206 aaKnown RBP15.64■□□□□ 0.09
SPHK1-202ENST00000392496 CITED1Q99966 193 aa15.64■□□□□ 0.09
SPHK1-202ENST00000392496 TEX43Q6ZNM6 134 aa15.63■□□□□ 0.09
SPHK1-202ENST00000392496 HSPB8Q9UJY1 196 aa15.63■□□□□ 0.09
SPHK1-202ENST00000392496 MGPP08493 103 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 LINC00315P59091 139 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 Q8N8P6 123 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 C19orf73Q9NVV2 129 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 PKIAP61925 76 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 NUTF2P61970 127 aaKnown RBP15.62■□□□□ 0.09
SPHK1-202ENST00000392496 TMEM70Q9BUB7 260 aa15.62■□□□□ 0.09
SPHK1-202ENST00000392496 IGLV2-18A0A075B6J9 118 aa15.61■□□□□ 0.09
SPHK1-202ENST00000392496 A0A096LNJ9 63 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms