RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 B4DSR2 109 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 LYRM1O43325 122 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 GNRH2O43555 120 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CPSF4O95639 269 aaKnown RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 LHBP01229 141 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 IL5P05113 134 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CD24P25063 80 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CKS2P33552 79 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 RPL28P46779 137 aaKnown RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ATP5EP56381 51 aaPredicted RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CCL8P80075 99 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 WFDC2Q14508 124 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 HMGN3Q15651 99 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ADIRFQ15847 76 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 LGALSLQ3ZCW2 172 aaPredicted RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 FAM229BQ4G0N7 80 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 NMSQ5H8A3 153 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 BVES-AS1Q5T3Y7 98 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 C2orf91Q6ZV80 131 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ARPINQ7Z6K5 226 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 Q8N814 137 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 OR10AG1Q8NH19 301 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 MUC7Q8TAX7 377 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PPDPFLQ8WWR9 84 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 SPTSSAQ969W0 71 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 RETNLBQ9BQ08 111 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PMCHL2Q9BQD1 86 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CXCL16Q9H2A7 254 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 SMDT1Q9H4I9 107 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 LINC00574Q9H8X3 128 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 SPCS1Q9Y6A9 102 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 MARF1Q9Y4F3 1742 aaKnown RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 RP1P56715 2156 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PPLO60437 1756 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 STRCQ7RTU9 1775 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 PLXNA3P51805 1871 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 NYNRINQ9P2P1 1898 aaKnown RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 NCOA2Q15596 1464 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 RPRD2Q5VT52 1461 aaKnown RBP1.05□□□□□ -2.24
TRAV40-201ENST00000390467 NLRP1Q9C000 1473 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 ADGRB3O60242 1522 aa1.05□□□□□ -2.24
TRAV40-201ENST00000390467 CUL9Q8IWT3 2517 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 IGKV1D-37A0A075B6S9 117 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 IGKV1OR2-108A0A075B7D4 117 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 A0A087WXM4 84 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 A0A0B4J2C4 111 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 C17orf98A8MV24 154 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 J3QLW9 94 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 M0R233 179 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ATOX1O00244 68 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 NUPR1O60356 82 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CREBL2O60519 120 aaPredicted RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CLPSP04118 112 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CCKP06307 115 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 MSMBP08118 114 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 PIRTP0C851 137 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ADCYAP1P18509 176 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 NFYAP23511 347 aaPredicted RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 FAUP35544 74 aaKnown RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 XCL1P47992 114 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 FXYD2P54710 66 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ROMO1P60602 79 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 RBM3P98179 157 aaKnown RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 Q1T7F1 81 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ETDBQ3ZM63 59 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LYZL1Q6UWQ5 148 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 Q6ZQT7 251 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 COMMD6Q7Z4G1 85 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LYZL2Q7Z4W2 148 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LINC00269Q8N2A0 174 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 FAM19A2Q8N3H0 131 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 FAM213BQ8TBF2 198 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 C18orf32Q8TCD1 76 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 Q96M85 177 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LINC00467Q9BRT7 94 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 SLC50A1Q9BRV3 221 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CST11Q9H112 138 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LINC00474Q9P2X8 69 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 FAM215AQ9Y5M1 114 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ICOSQ9Y6W8 199 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 EML5Q05BV3 1969 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 EXPH5Q8NEV8 1989 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CASP8AP2Q9UKL3 1982 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 MPDZO75970 2070 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 ANKARQ7Z5J8 1434 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 SCAF11Q99590 1463 aaKnown RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 EPRSP07814 1512 aaKnown RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 PRDM15P57071 1507 aaPredicted RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 DIP2BQ9P265 1576 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 INO80Q9ULG1 1556 aaPredicted RBP1.04□□□□□ -2.24
TRAV40-201ENST00000390467 CC2D2AQ9P2K1 1620 aa1.04□□□□□ -2.24
TRAV40-201ENST00000390467 LTN1O94822 1766 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 PLXNA2O75051 1894 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 LCTP09848 1927 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TCHHQ07283 1943 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 MDC1Q14676 2089 aaKnown RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 MYOFQ9NZM1 2061 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 PRRC2BQ5JSZ5 2229 aaKnown RBP1.03□□□□□ -2.24
TRAV40-201ENST00000390467 TRAV7A0A075B6U4 112 aa1.03□□□□□ -2.24
TRAV40-201ENST00000390467 IGKV2D-26A0A0A0MRZ7 120 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms