RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 G3V318 75 aa11.78□□□□□ -0.52
LRCH1-202ENST00000389797 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
LRCH1-202ENST00000389797 Q6ZQT7 251 aa11.78□□□□□ -0.52
LRCH1-202ENST00000389797 ANAPC13Q9BS18 74 aa11.78□□□□□ -0.52
LRCH1-202ENST00000389797 TRBV7-1A0A0A6YYK4 115 aa11.77□□□□□ -0.52
LRCH1-202ENST00000389797 KLK15Q9H2R5 256 aa11.77□□□□□ -0.52
LRCH1-202ENST00000389797 FLNCQ14315 2725 aa11.77□□□□□ -0.53
LRCH1-202ENST00000389797 MYMXA0A1B0GTQ4 84 aa11.77□□□□□ -0.53
LRCH1-202ENST00000389797 RRN3P1Q2M238 152 aa11.77□□□□□ -0.53
LRCH1-202ENST00000389797 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 LINC01619G3V211 115 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 SUMO2P61956 95 aaKnown RBP11.76□□□□□ -0.53
LRCH1-202ENST00000389797 SIRPDQ9H106 197 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 LENEPQ9Y5L5 61 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 CSMD1Q96PZ7 3565 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 SLC25A16P16260 332 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 GAGE13Q4V321 117 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 PPDPFQ9H3Y8 114 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 U3KQE9 123 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 USP24Q9UPU5 2620 aa11.76□□□□□ -0.53
LRCH1-202ENST00000389797 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 AMTNQ6UX39 209 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 TOMM6Q96B49 74 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 RAX2Q96IS3 184 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 M0R381 172 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
LRCH1-202ENST00000389797 UBE2E1P51965 193 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 C9orf139Q6ZV77 190 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 VPREB3Q9UKI3 123 aa11.75□□□□□ -0.53
LRCH1-202ENST00000389797 A0A1B0GWB2 263 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 AKAP6Q13023 2319 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 LINC01548A6NM66 108 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 ATP5G2Q06055 141 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 PRR9Q5T870 116 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 NEXN-AS1Q8NBZ9 246 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 CYSLTR1Q9Y271 337 aa11.74□□□□□ -0.53
LRCH1-202ENST00000389797 RASL10AQ92737 203 aa11.73□□□□□ -0.53
LRCH1-202ENST00000389797 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
LRCH1-202ENST00000389797 SAA4P35542 130 aa11.73□□□□□ -0.53
LRCH1-202ENST00000389797 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
LRCH1-202ENST00000389797 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
LRCH1-202ENST00000389797 PHLDA3Q9Y5J5 127 aa11.73□□□□□ -0.53
LRCH1-202ENST00000389797 C2orf66Q6UXQ4 117 aa11.72□□□□□ -0.53
LRCH1-202ENST00000389797 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
LRCH1-202ENST00000389797 PTH2Q96A98 100 aa11.72□□□□□ -0.53
LRCH1-202ENST00000389797 SPAG8Q99932 426 aaPredicted RBP11.72□□□□□ -0.53
LRCH1-202ENST00000389797 USP9XQ93008 2570 aaPredicted RBP11.72□□□□□ -0.53
LRCH1-202ENST00000389797 IGF1P05019 195 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 ASIPP42127 132 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 OR10J6PQ8NGY7 276 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 CENPVL3A0A0U1RRI6 287 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 LGALS1P09382 135 aaKnown RBP11.71□□□□□ -0.53
LRCH1-202ENST00000389797 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
LRCH1-202ENST00000389797 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.53
LRCH1-202ENST00000389797 SPTAN1Q13813 2472 aaKnown RBP11.71□□□□□ -0.53
LRCH1-202ENST00000389797 BAALCQ8WXS3 180 aa11.71□□□□□ -0.54
LRCH1-202ENST00000389797 SPRY2O43597 315 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 MGPP08493 103 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ANXA2RQ3ZCQ2 193 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 C20orf173Q96LM9 149 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ERG28Q9UKR5 140 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 PRSS29PA6NIE9 313 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 SCGB1D4Q6XE38 83 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
LRCH1-202ENST00000389797 PRO0461Q9UI25 63 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ZNF815PA8K554 130 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 OVOL1O14753 267 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
LRCH1-202ENST00000389797 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
LRCH1-202ENST00000389797 PPP1R17O96001 155 aa11.69□□□□□ -0.54
LRCH1-202ENST00000389797 DOPEY1Q5JWR5 2465 aa11.69□□□□□ -0.54
LRCH1-202ENST00000389797 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
LRCH1-202ENST00000389797 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
LRCH1-202ENST00000389797 C5orf56Q8N8D9 126 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 C1QTNF4Q9BXJ3 329 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
LRCH1-202ENST00000389797 ZFYVE26Q68DK2 2539 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 FAM223BA6NKX1 122 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
LRCH1-202ENST00000389797 CSDC2Q9Y534 153 aaKnown RBP11.68□□□□□ -0.54
LRCH1-202ENST00000389797 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
LRCH1-202ENST00000389797 MED14OSP0DP75 135 aa11.67□□□□□ -0.54
LRCH1-202ENST00000389797 LCNL1Q6ZST4 164 aa11.67□□□□□ -0.54
LRCH1-202ENST00000389797 NPFFO15130 113 aa11.66□□□□□ -0.54
LRCH1-202ENST00000389797 RNASE4P34096 147 aaKnown RBP11.66□□□□□ -0.54
LRCH1-202ENST00000389797 APOMO95445 188 aa11.66□□□□□ -0.54
LRCH1-202ENST00000389797 DLX4Q92988 240 aaPredicted RBP11.66□□□□□ -0.54
LRCH1-202ENST00000389797 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
LRCH1-202ENST00000389797 ABCA2Q9BZC7 2435 aa11.66□□□□□ -0.54
LRCH1-202ENST00000389797 LINC01549A6NIU2 74 aa11.65□□□□□ -0.54
LRCH1-202ENST00000389797 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
LRCH1-202ENST00000389797 MRPL23Q16540 153 aaKnown RBP11.65□□□□□ -0.54
LRCH1-202ENST00000389797 TMEM219Q86XT9 240 aa11.65□□□□□ -0.54
LRCH1-202ENST00000389797 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms