RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
VCX3A-201ENST00000381089 UBE2G2P60604 165 aa10.76□□□□□ -0.69
VCX3A-201ENST00000381089 HAMPP81172 84 aa10.76□□□□□ -0.69
VCX3A-201ENST00000381089 NHLRC2Q8NBF2 726 aa10.76□□□□□ -0.69
VCX3A-201ENST00000381089 TMEM167BQ9NRX6 74 aa10.76□□□□□ -0.69
VCX3A-201ENST00000381089 TRAV8-6A0A0B4J262 113 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 TIRAPP58753 221 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 Q6AWC8 147 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 RPH3ALQ9UNE2 315 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 LENEPQ9Y5L5 61 aa10.75□□□□□ -0.69
VCX3A-201ENST00000381089 LINC01556Q5JQF7 62 aa10.74□□□□□ -0.69
VCX3A-201ENST00000381089 Q8N814 137 aa10.74□□□□□ -0.69
VCX3A-201ENST00000381089 OTORQ9NRC9 128 aa10.74□□□□□ -0.69
VCX3A-201ENST00000381089 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
VCX3A-201ENST00000381089 LRCOL1A6NCL2 159 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 PGPA6NDG6 321 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 IBA57-AS1B1ANH7 110 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 M0R2P5 195 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 PLA2G1BP04054 148 aaKnown RBP10.73□□□□□ -0.69
VCX3A-201ENST00000381089 CCL20P78556 96 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
VCX3A-201ENST00000381089 GGTLC3B5MD39 225 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
VCX3A-201ENST00000381089 GNG5P63218 68 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 TDRG1Q3Y452 100 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 TEX261Q6UWH6 196 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 CMTM2Q8TAZ6 248 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 Q9HAA7 133 aa10.72□□□□□ -0.69
VCX3A-201ENST00000381089 CST9LP1Q5W188 147 aa10.71□□□□□ -0.69
VCX3A-201ENST00000381089 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
VCX3A-201ENST00000381089 GNG13Q9P2W3 67 aa10.71□□□□□ -0.69
VCX3A-201ENST00000381089 TRAV1-1A0A0B4J248 108 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 LOC100131303A0A0U1RQF7 123 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 FAM74A7A6NL05 159 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 PAGE4O60829 102 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 IFNA7P01567 189 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 GATA1P15976 413 aaPredicted RBP10.7□□□□□ -0.7
VCX3A-201ENST00000381089 SUMO1P63165 101 aaKnown RBP10.7□□□□□ -0.7
VCX3A-201ENST00000381089 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
VCX3A-201ENST00000381089 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 FBLL1A6NHQ2 334 aaKnown RBP10.69□□□□□ -0.7
VCX3A-201ENST00000381089 CIDEAO60543 219 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 GOLT1AQ6ZVE7 132 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 KCNS1Q96KK3 526 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 SDF2L1Q9HCN8 221 aa10.69□□□□□ -0.7
VCX3A-201ENST00000381089 IGHV3-16A0A0C4DH30 117 aa10.68□□□□□ -0.7
VCX3A-201ENST00000381089 LAGE3Q14657 143 aa10.68□□□□□ -0.7
VCX3A-201ENST00000381089 RHOHQ15669 191 aa10.68□□□□□ -0.7
VCX3A-201ENST00000381089 C5orf17Q8NAS9 161 aa10.68□□□□□ -0.7
VCX3A-201ENST00000381089 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
VCX3A-201ENST00000381089 GNRH2O43555 120 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 IGHV3-33P01772 117 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 IGHV3-30-3P0DP02 117 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 LELP1Q5T871 98 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 MANBALQ9NQG1 85 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 FAM30AQ9NZY2 134 aa10.67□□□□□ -0.7
VCX3A-201ENST00000381089 TRAV8-1A0A0A6YYK1 113 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
VCX3A-201ENST00000381089 IFNA1P01562 189 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 TCRAP04437 139 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 TYMSP04818 313 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 EPDR1Q9UM22 224 aa10.66□□□□□ -0.7
VCX3A-201ENST00000381089 TRBV6-4A0A1B0GX49 114 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 PEX7O00628 323 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 ZNF876PQ49A33 203 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 SLC25A29Q8N8R3 303 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 TREM1Q9NP99 234 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.7
VCX3A-201ENST00000381089 SCO2A0A1W2PP80 73 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 BCL2P10415 239 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 IFITM2Q01629 132 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 ARL6IP6Q8N6S5 226 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 CYB561D1Q8N8Q1 229 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 NKX6-2Q9C056 277 aaPredicted RBP10.64□□□□□ -0.71
VCX3A-201ENST00000381089 GTSF1LQ9H1H1 148 aa10.64□□□□□ -0.71
VCX3A-201ENST00000381089 TRAV8-3A0A0A6YYJ7 113 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 F6UZH7 168 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 TOR2AQ5JU69 321 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 SERTAD4-AS1Q5TG53 156 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 SYT8Q8NBV8 401 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 ATP6V0E2Q8NHE4 81 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
VCX3A-201ENST00000381089 K7EQM0 130 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 AKR1C3P42330 323 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 Q6ZSA8 131 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 PRNTQ86SH4 94 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms