RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
PRPF40B-202ENST00000380281 TRBV7-3A0A075B6L6 115 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 IGHG4P01861 327 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 SRSF1Q07955 248 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 RAXQ9Y2V3 346 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 CSMD2Q7Z408 3487 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 ITPR1Q14643 2758 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 DTX2Q86UW9 622 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
PRPF40B-202ENST00000380281 A0A1W2PPR1 153 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE12JA6NER3 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE7O76087 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE12FP0CL80 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE12GP0CL81 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE12IP0CL82 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 HOXB4P17483 251 aaPredicted RBP9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE4Q13068 117 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 AGPAT4-IT1Q9H0P7 198 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 CRLF1O75462 422 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 EMP1P54849 157 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 F6UB75 175 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 ZNF688P0C7X2 276 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
PRPF40B-202ENST00000380281 SAA4P35542 130 aa9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 ID1P41134 155 aa9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 LYPD1Q8N2G4 141 aa9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 LY6DQ14210 128 aa9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 ANKRD29Q8N6D5 301 aa9.56□□□□□ -0.88
PRPF40B-202ENST00000380281 MGPP08493 103 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 TMEM78Q5T7P6 136 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 C1orf122Q6ZSJ8 110 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 PKD1L2Q7Z442 2459 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 IGKV3D-20A0A0C4DH25 116 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 S100A4P26447 101 aaKnown RBP9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 TAL2Q16559 108 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 C16orf92Q96LL3 132 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 TCL1BO95988 128 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 OR11H6Q8NGC7 330 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
PRPF40B-202ENST00000380281 IGKV3-20P01619 116 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 TTC32Q5I0X7 151 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 Q8N9W7 124 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 MSRB2Q9Y3D2 182 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 PIEZO1Q92508 2521 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 TRAV8-2A0A0B4J237 113 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 CITED1Q99966 193 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 BPESC1Q9GZL8 116 aa9.54□□□□□ -0.88
PRPF40B-202ENST00000380281 ADORA2A-AS1P86434 159 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 PDE6HQ13956 83 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 ATP5LO75964 103 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 ARL3P36405 182 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 NPBQ8NG41 125 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 RNF5Q99942 180 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 A8MWV9 139 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 RHODO00212 210 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 BUB3O43684 328 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 SNCGO76070 127 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 TNFRSF18Q9Y5U5 241 aa9.53□□□□□ -0.88
PRPF40B-202ENST00000380281 NAV2Q8IVL1 2488 aa9.52□□□□□ -0.88
PRPF40B-202ENST00000380281 CFAP46Q8IYW2 2715 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 JMJD1CQ15652 2540 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 K7ENP7 123 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 SCGB1D4Q6XE38 83 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 ZNF575Q86XF7 245 aa9.52□□□□□ -0.89
PRPF40B-202ENST00000380281 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 SCGB1C2P0DMR2 95 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 PLEKHB2Q96CS7 222 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 CCDC140Q96MF4 163 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 IFITM1P13164 125 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 PRR9Q5T870 116 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 PPDPFQ9H3Y8 114 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 A0A087WX48 190 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 RPL39LQ96EH5 51 aaKnown RBP9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 METTL26Q96S19 204 aa9.51□□□□□ -0.89
PRPF40B-202ENST00000380281 PSMG4Q5JS54 123 aa9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 UNQ9165/PRO28630Q6UXU0 137 aa9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 EPG5Q9HCE0 2579 aa9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 ODF3BA8MYP8 253 aa9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 RNASE4P34096 147 aaKnown RBP9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
PRPF40B-202ENST00000380281 KLHL30-AS1Q8NEE0 82 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms