RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PPBPP02775 128 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 C3orf79P0CE67 100 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 HLA-DRB4P13762 266 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 SPAG8Q99932 426 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 MAP6D1Q9H9H5 199 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 SIGLEC8Q9NYZ4 499 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 HLA-DRB4X5D2U9 266 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 OR4C46A6NHA9 309 aa14.7□□□□□ -0.06
PDLIM5-205ENST00000380180 TRAV25A0A0B4J276 109 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 H3BMM0 161 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 CD7P09564 240 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 NSUN5P1Q3KNT7 163 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 TDRG1Q3Y452 100 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 AP5S1Q9NUS5 200 aa14.69□□□□□ -0.06
PDLIM5-205ENST00000380180 FA2HQ7L5A8 372 aa14.68□□□□□ -0.06
PDLIM5-205ENST00000380180 A8MTW9 85 aa14.68□□□□□ -0.06
PDLIM5-205ENST00000380180 FXYD7P58549 80 aa14.68□□□□□ -0.06
PDLIM5-205ENST00000380180 KRTAP10-3P60369 221 aa14.68□□□□□ -0.06
PDLIM5-205ENST00000380180 GATA1P15976 413 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-205ENST00000380180 ZNF664Q8N3J9 261 aa14.67□□□□□ -0.06
PDLIM5-205ENST00000380180 Q8N976 141 aa14.67□□□□□ -0.06
PDLIM5-205ENST00000380180 BAHCC1Q9P281 2608 aa14.67□□□□□ -0.06
PDLIM5-205ENST00000380180 C2CD3Q4AC94 2353 aa14.67□□□□□ -0.06
PDLIM5-205ENST00000380180 PRO1933Q9H354 126 aa14.66□□□□□ -0.06
PDLIM5-205ENST00000380180 TNFRSF6BO95407 300 aa14.66□□□□□ -0.06
PDLIM5-205ENST00000380180 LAMTOR2Q9Y2Q5 125 aa14.66□□□□□ -0.06
PDLIM5-205ENST00000380180 RBMY1BA6NDE4 496 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 RBMY1EA6NEQ0 496 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 LEPROTL1O95214 131 aa14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 RBMY1DP0C7P1 496 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 PKIAP61925 76 aa14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 IGHV1OR15-1A0A075B7D0 117 aa14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 TRAV26-2A0A0B4J265 109 aa14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 CRXO43186 299 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-205ENST00000380180 LINC00173Q6ZV60 143 aa14.64□□□□□ -0.07
PDLIM5-205ENST00000380180 Q8N1Y9 231 aa14.64□□□□□ -0.07
PDLIM5-205ENST00000380180 C14orf178Q8N769 122 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-205ENST00000380180 MAP1LC3AQ9H492 121 aa14.64□□□□□ -0.07
PDLIM5-205ENST00000380180 IGHV3-16A0A0C4DH30 117 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 LINC00587B1AMM8 73 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 SAP30O75446 220 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 BTF3P20290 206 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 ODF3L2Q3SX64 289 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 MDFICQ9P1T7 246 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 CRLF1O75462 422 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 NXPH4O95158 308 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 RBMY1A1P0DJD3 496 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 RBMY1CP0DJD4 496 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 RBMY1FQ15415 496 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 TEX43Q6ZNM6 134 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 OR2K2Q8NGT1 345 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 DPH3P1Q9H4G8 78 aa14.63□□□□□ -0.07
PDLIM5-205ENST00000380180 TSTD3H0UI37 97 aa14.62□□□□□ -0.07
PDLIM5-205ENST00000380180 NDUFA11Q86Y39 141 aa14.62□□□□□ -0.07
PDLIM5-205ENST00000380180 NRACQ8N912 160 aa14.61□□□□□ -0.07
PDLIM5-205ENST00000380180 C9orf85Q96MD7 179 aa14.61□□□□□ -0.07
PDLIM5-205ENST00000380180 NIPBLQ6KC79 2804 aaeCLIP14.61□□□□□ -0.07
PDLIM5-205ENST00000380180 MRAP2Q96G30 205 aa14.61□□□□□ -0.07
PDLIM5-205ENST00000380180 AP1S3Q96PC3 154 aa14.61□□□□□ -0.07
PDLIM5-205ENST00000380180 FLNBO75369 2602 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-205ENST00000380180 A0A096LNJ9 63 aa14.6□□□□□ -0.07
PDLIM5-205ENST00000380180 TMEM70Q9BUB7 260 aa14.6□□□□□ -0.07
PDLIM5-205ENST00000380180 JPT2Q9H910 190 aa14.59□□□□□ -0.07
PDLIM5-205ENST00000380180 OR11H12B2RN74 326 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 IGLV1-51P01701 117 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 SPATA12Q7Z6I5 190 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 NXT2Q9NPJ8 142 aaKnown RBP14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 HSPB8Q9UJY1 196 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 KIF25-AS1Q9Y6Z4 181 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 LINC01546A6NGU7 62 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 CBY3A6NI87 242 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 SYS1-DBNDD2H3BUS1 97 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 MGPP08493 103 aa14.58□□□□□ -0.08
PDLIM5-205ENST00000380180 PRSS47A8MTI9 375 aa14.57□□□□□ -0.08
PDLIM5-205ENST00000380180 HTN1P15515 57 aa14.57□□□□□ -0.08
PDLIM5-205ENST00000380180 CLUHP3Q96NS8 147 aa14.57□□□□□ -0.08
PDLIM5-205ENST00000380180 ZNF747Q9BV97 191 aa14.57□□□□□ -0.08
PDLIM5-205ENST00000380180 IGLV2-18A0A075B6J9 118 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 TRGV11A0A075B6L2 103 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 LINC00315P59091 139 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 STHQ8IWL8 128 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 VAMP8Q9BV40 100 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 MAP1LC3CQ9BXW4 147 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 SMIM17P0DL12 118 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 DEFB125Q8N687 156 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 Q8N8P6 123 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 RASL10AQ92737 203 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 PAM16Q9Y3D7 125 aa14.56□□□□□ -0.08
PDLIM5-205ENST00000380180 F8P00451 2351 aa14.55□□□□□ -0.08
PDLIM5-205ENST00000380180 HBDP02042 147 aa14.55□□□□□ -0.08
PDLIM5-205ENST00000380180 ATOH7Q8N100 152 aa14.55□□□□□ -0.08
PDLIM5-205ENST00000380180 POM121L12Q8N7R1 296 aa14.55□□□□□ -0.08
PDLIM5-205ENST00000380180 PF4P02776 101 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 PRM2P04554 102 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 DDTP30046 118 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 SYT8Q8NBV8 401 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 JMJD1CQ15652 2540 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 A0A087WWL8 130 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 KIR2DL5BA0A0G2JN68 375 aa14.54□□□□□ -0.08
PDLIM5-205ENST00000380180 KIR2DL5BA0A0G2JPC4 375 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms