RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 OR11H1Q8NG94 326 aa10.08□□□□□ -0.8
NCDN-203ENST00000373253 USMG5Q96IX5 58 aa10.08□□□□□ -0.8
NCDN-203ENST00000373253 CLPSL1A2RUU4 121 aa10.07□□□□□ -0.8
NCDN-203ENST00000373253 SLC25A16P16260 332 aa10.07□□□□□ -0.8
NCDN-203ENST00000373253 SMIM12Q96EX1 92 aa10.07□□□□□ -0.8
NCDN-203ENST00000373253 JMJD8Q96S16 334 aa10.07□□□□□ -0.8
NCDN-203ENST00000373253 K7EP13 123 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
NCDN-203ENST00000373253 TCTEX1D4Q5JR98 221 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
NCDN-203ENST00000373253 UBR5O95071 2799 aaPredicted RBP10.06□□□□□ -0.8
NCDN-203ENST00000373253 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 NDUFA4O00483 81 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 IGHG2P01859 326 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 PRR9Q5T870 116 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 IGHV7-4-1A0A0J9YVY3 117 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 H3BUT2 72 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 CTRLP40313 264 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 NSUN5P1Q3KNT7 163 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
NCDN-203ENST00000373253 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 A0A087WW49 117 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 C2orf70A6NJV1 201 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 OR1N2Q8NGR9 330 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 HOXD3P31249 432 aaPredicted RBP10.05□□□□□ -0.8
NCDN-203ENST00000373253 OR2K2Q8NGT1 345 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 MRPS16Q9Y3D3 137 aaKnown RBP10.05□□□□□ -0.8
NCDN-203ENST00000373253 F8P00451 2351 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 A6NDX4 124 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 APRG1Q8IVJ8 170 aa10.05□□□□□ -0.8
NCDN-203ENST00000373253 CIDEAO60543 219 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 Q8N976 141 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 OVOL1O14753 267 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 C16orf54Q6UWD8 224 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
NCDN-203ENST00000373253 IGHV3-16A0A0C4DH30 117 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 C12orf54Q6X4T0 127 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 MS4A6AQ9H2W1 248 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 VPS13CQ709C8 3753 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 A0A1B0GW15 77 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 IGHV3-53P01767 116 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 IGHG4P01861 327 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 ZC2HC1BQ5TFG8 222 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 TMEM190Q8WZ59 177 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 LINC01587Q99440 93 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 XCL2Q9UBD3 114 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 TAX1BP3O14907 124 aa10.03□□□□□ -0.8
NCDN-203ENST00000373253 UNC79Q9P2D8 2635 aa10.02□□□□□ -0.8
NCDN-203ENST00000373253 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.8
NCDN-203ENST00000373253 KLF5Q13887 457 aaPredicted RBP10.02□□□□□ -0.8
NCDN-203ENST00000373253 PET117Q6UWS5 81 aa10.02□□□□□ -0.8
NCDN-203ENST00000373253 PCP2Q8IVA1 136 aa10.02□□□□□ -0.8
NCDN-203ENST00000373253 APCP25054 2843 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 DSCR9P59020 149 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 DEFB113Q30KQ7 82 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 VPREB3Q9UKI3 123 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
NCDN-203ENST00000373253 CD300EQ496F6 205 aaPredicted RBP10.02□□□□□ -0.81
NCDN-203ENST00000373253 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
NCDN-203ENST00000373253 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
NCDN-203ENST00000373253 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
NCDN-203ENST00000373253 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
NCDN-203ENST00000373253 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
NCDN-203ENST00000373253 SETXQ7Z333 2677 aaKnown RBP10□□□□□ -0.81
NCDN-203ENST00000373253 PPBPP02775 128 aa10□□□□□ -0.81
NCDN-203ENST00000373253 CLUHP3Q96NS8 147 aa10□□□□□ -0.81
NCDN-203ENST00000373253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
NCDN-203ENST00000373253 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
NCDN-203ENST00000373253 ESDP10768 282 aa10□□□□□ -0.81
NCDN-203ENST00000373253 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
NCDN-203ENST00000373253 H7C2G1 150 aa9.99□□□□□ -0.81
NCDN-203ENST00000373253 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
NCDN-203ENST00000373253 LAGE3Q14657 143 aa9.99□□□□□ -0.81
NCDN-203ENST00000373253 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
NCDN-203ENST00000373253 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
NCDN-203ENST00000373253 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
NCDN-203ENST00000373253 PHLDA1Q8WV24 401 aaPredicted RBP9.99□□□□□ -0.81
NCDN-203ENST00000373253 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
NCDN-203ENST00000373253 ZNF48Q96MX3 618 aaPredicted RBP9.98□□□□□ -0.81
NCDN-203ENST00000373253 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
NCDN-203ENST00000373253 CFHR3Q02985 330 aa9.98□□□□□ -0.81
NCDN-203ENST00000373253 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
NCDN-203ENST00000373253 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
NCDN-203ENST00000373253 MUC4Q99102 2169 aa9.98□□□□□ -0.81
NCDN-203ENST00000373253 IGHV4-31P0DP07 118 aa9.97□□□□□ -0.81
NCDN-203ENST00000373253 DGAT2L7PQ6IED9 249 aa9.97□□□□□ -0.81
NCDN-203ENST00000373253 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
NCDN-203ENST00000373253 HIST1H4GQ99525 98 aa9.97□□□□□ -0.81
NCDN-203ENST00000373253 SMR3AQ99954 134 aa9.97□□□□□ -0.81
NCDN-203ENST00000373253 GATA3P23771 443 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms