RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MYO7BQ6PIF6 2116 aa8.96□□□□□ -0.97
VCL-202ENST00000372755 DEFB125Q8N687 156 aa8.96□□□□□ -0.97
VCL-202ENST00000372755 ZNF524Q96C55 264 aa8.96□□□□□ -0.97
VCL-202ENST00000372755 KLF2Q9Y5W3 355 aaPredicted RBP8.96□□□□□ -0.97
VCL-202ENST00000372755 K7EIM0 57 aa8.96□□□□□ -0.98
VCL-202ENST00000372755 LYPD6BQ8NI32 183 aa8.96□□□□□ -0.98
VCL-202ENST00000372755 PSMB8P28062 276 aa8.96□□□□□ -0.98
VCL-202ENST00000372755 ATOX1O00244 68 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 AKAP6Q13023 2319 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 IGHV4-30-2A0A087WSY4 118 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 SPRY2O43597 315 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 CTSGP08311 255 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 GRNP28799 593 aaKnown RBP8.95□□□□□ -0.98
VCL-202ENST00000372755 LTBP1Q14766 1721 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 K7EMT4 169 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 MED14OSP0DP75 135 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 PLXNA3P51805 1871 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 JMJD7-PLA2G4BH0Y9G9 81 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 HHLA3Q9XRX5 114 aa8.95□□□□□ -0.98
VCL-202ENST00000372755 TRBV7-3A0A075B6L6 115 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 MYCNOSP40205 109 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 A4D1N5 150 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 NCR3O14931 201 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 FANCMQ8IYD8 2048 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 TMEM89A2RUT3 159 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 C10orf105Q8TEF2 133 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 KLK5Q9Y337 293 aaPredicted RBP8.94□□□□□ -0.98
VCL-202ENST00000372755 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 NDUFC2O95298 119 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 IGFL2Q6UWQ7 119 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 C5orf56Q8N8D9 126 aa8.94□□□□□ -0.98
VCL-202ENST00000372755 IGHV4OR15-8A0A075B7B6 117 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 A0A087WW49 117 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 WI2-2373I1.2A0A1W2PRP0 233 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 BLCAPP62952 87 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 SMIM20Q8N5G0 67 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 C2orf70A6NJV1 201 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 IGKV1-17P01599 117 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
VCL-202ENST00000372755 SBF1O95248 1867 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 KIR2DL5BA0A0G2JN68 375 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 KIR2DL5BA0A0G2JPC4 375 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 KIR2DL5AQ8N109 375 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 Q8N1Y9 231 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 DIRC1Q969H9 104 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 PRB1P04280 392 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 Q8N9W7 124 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 C4orf3Q8WVX3 66 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 FANCD2OSQ96PS1 177 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 CEP250Q9BV73 2442 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 COL4A6Q14031 1691 aa8.92□□□□□ -0.98
VCL-202ENST00000372755 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 B5MCH6 92 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 IGF2-ASQ6U949 168 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 C14orf132Q9NPU4 83 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 KRTAP27-1Q3LI81 207 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 SPRNQ5BIV9 151 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 HIGD1BQ9P298 99 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 PATE2Q6UY27 113 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
VCL-202ENST00000372755 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
VCL-202ENST00000372755 GPHB5Q86YW7 130 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 PROP1O75360 226 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 TMEM61Q8N0U2 210 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 RITA1Q96K30 269 aa8.91□□□□□ -0.98
VCL-202ENST00000372755 ZSWIM8A7E2V4 1837 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 BAALCQ8WXS3 180 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.98
VCL-202ENST00000372755 SIP14410 1827 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 ARFGEF3Q5TH69 2177 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 ESM1Q9NQ30 184 aa8.9□□□□□ -0.98
VCL-202ENST00000372755 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.99
VCL-202ENST00000372755 SEC61GP60059 68 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 DAZAP2Q15038 168 aaPredicted RBP8.89□□□□□ -0.99
VCL-202ENST00000372755 ANK1P16157 1881 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 TP53BP1Q12888 1972 aaPredicted RBP8.89□□□□□ -0.99
VCL-202ENST00000372755 LECT2O14960 151 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 LGALS9O00182 355 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 RPL39P62891 51 aaKnown RBP8.89□□□□□ -0.99
VCL-202ENST00000372755 HEATR1Q9H583 2144 aaKnown RBP8.89□□□□□ -0.99
VCL-202ENST00000372755 E9PLD3 99 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 SEM1Q6ZVN7 128 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 B9D2Q9BPU9 175 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 SS18L2Q9UHA2 77 aa8.89□□□□□ -0.99
VCL-202ENST00000372755 PDE6GP18545 87 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 SMAD5-AS1Q9Y6J3 95 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 TMEM256-PLSCR3K7ERE1 68 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 DAND5Q8N907 189 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 IL17DQ8TAD2 202 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 PTPRDP23468 1912 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 TRBV10-2A0A0K0K1G8 114 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 INSL3P51460 131 aa8.88□□□□□ -0.99
VCL-202ENST00000372755 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
VCL-202ENST00000372755 FAM236AA0A1B0GUQ0 79 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms