RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 ORMDL3Q8N138 153 aa6.76□□□□□ -1.33
SMARCA1-203ENST00000371123 DPM3Q9P2X0 92 aa6.76□□□□□ -1.33
SMARCA1-203ENST00000371123 TM4SF5O14894 197 aa6.76□□□□□ -1.33
SMARCA1-203ENST00000371123 ATP6V0E2Q8NHE4 81 aa6.76□□□□□ -1.33
SMARCA1-203ENST00000371123 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
SMARCA1-203ENST00000371123 RHODO00212 210 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 LGALS1P09382 135 aaKnown RBP6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 CSMD2Q7Z408 3487 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 IGHG4P01861 327 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 CD7P09564 240 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 ANKRD29Q8N6D5 301 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 C14orf178Q8N769 122 aaPredicted RBP6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 A0A087WWL8 130 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 LINC01549A6NIU2 74 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 LHBP01229 141 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 UBE2D1P51668 147 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 MAP1LC3AQ9H492 121 aa6.75□□□□□ -1.33
SMARCA1-203ENST00000371123 SH2D1AO60880 128 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 LOXP28300 417 aaPredicted RBP6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 INS-IGF2F8WCM5 200 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 TRGV3P03979 118 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 DLX6P56179 175 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 FAM57AQ8TBR7 257 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 ODF3Q96PU9 254 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 FABP5P3A8MUU1 101 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 RASL10AQ92737 203 aa6.74□□□□□ -1.33
SMARCA1-203ENST00000371123 NBR2O15453 112 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 ZNF833PQ6ZTB9 187 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 OTORQ9NRC9 128 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 FLNCQ14315 2725 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 TRBV19A0A075B6N1 114 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 TRBV6-1A0A0K0K1D8 114 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 KNCNA6PVL3 124 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 J3QR89 54 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 IGLC6P0CF74 106 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 COX6B1P14854 86 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 FAM159AQ6UWV7 190 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 Q6ZS46 218 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 Q6ZS92 163 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 IL17RELQ6ZVW7 336 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 VPREB3Q9UKI3 123 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 THBDP07204 575 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 TEX36Q5VZQ5 186 aa6.73□□□□□ -1.33
SMARCA1-203ENST00000371123 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 TMEM167AQ8TBQ9 72 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 NBEAL2Q6ZNJ1 2754 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 CRYBG3Q68DQ2 2970 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 PRAC2D3DTV9 90 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 BUB1B-PAK6H3BSN5 160 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 NRGNQ92686 78 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 ANKRD17O75179 2603 aaKnown RBP6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 NRACQ8N912 160 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 KLHL30-AS1Q8NEE0 82 aa6.72□□□□□ -1.33
SMARCA1-203ENST00000371123 DPM2O94777 84 aa6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 IGKV1-17P01599 117 aa6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 ATP5J2P56134 94 aa6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 ZNF56Q15929 161 aa6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 C11orf21Q9P2W6 132 aa6.71□□□□□ -1.33
SMARCA1-203ENST00000371123 TRAV12-3A0A0B4J271 114 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 A0A1B0GW15 77 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 RNF223E7ERA6 249 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 SCGB3A1Q96QR1 104 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 TRGV9Q99603 122 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 LINC00574Q9H8X3 128 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 C1orf162Q8NEQ5 155 aaPredicted RBP6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.34
SMARCA1-203ENST00000371123 TAL2Q16559 108 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 PPDPFLQ8WWR9 84 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 LINC01587Q99440 93 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 IGHG3P01860 377 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 ZFAND6Q6FIF0 208 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 DLX4Q92988 240 aaPredicted RBP6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 RAX2Q96IS3 184 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 METTL26Q96S19 204 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 CFC1P0CG37 223 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 VMO1Q7Z5L0 202 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
SMARCA1-203ENST00000371123 M0QXV9 152 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 IGF2-ASQ6U949 168 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 TMEM14CQ9P0S9 112 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 MUC4Q99102 2169 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 ZANQ9Y493 2812 aa6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 MBD3L4A6NDZ8 208 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 MBD3L3A6NE82 208 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 MBD3L5A6NJ08 208 aaPredicted RBP6.69□□□□□ -1.34
SMARCA1-203ENST00000371123 TEX22C9J3V5 150 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms