RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 J3QQQ9 107 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 C11orf68Q9H3H3 251 aaKnown RBP9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 HIVEP2P31629 2446 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 IGHV4-30-2A0A087WSY4 118 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 PRSS47A8MTI9 375 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 AJUBAQ96IF1 538 aa9.22□□□□□ -0.93
DEPDC1-201ENST00000370966 BLCAPP62952 87 aa9.21□□□□□ -0.93
DEPDC1-201ENST00000370966 TRAV8-3A0A0A6YYJ7 113 aa9.21□□□□□ -0.93
DEPDC1-201ENST00000370966 IGHV4-38-2P0DP08 117 aa9.21□□□□□ -0.93
DEPDC1-201ENST00000370966 GTSF1Q8WW33 167 aa9.21□□□□□ -0.93
DEPDC1-201ENST00000370966 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.93
DEPDC1-201ENST00000370966 GAGE7O76087 117 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 GAGE12FP0CL80 117 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 GAGE12GP0CL81 117 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 GAGE12IP0CL82 117 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 CEND1Q8N111 149 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 DNAJC30Q96LL9 226 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 PRO1854Q9UHT4 67 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 TLN1Q9Y490 2541 aaKnown RBP9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 F8W1H4 67 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 J3QKU1 62 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 K7EP34 96 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 CCL25O15444 150 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 ZNF295-AS1Q8N0V1 137 aa9.21□□□□□ -0.94
DEPDC1-201ENST00000370966 NAV3Q8IVL0 2385 aa9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 K7EMT4 169 aa9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 FSTL3O95633 263 aa9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 FANCD2OSQ96PS1 177 aa9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 SPAG8Q99932 426 aaPredicted RBP9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
DEPDC1-201ENST00000370966 MUC22E2RYF6 1773 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 K7EP13 123 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 DAD1P61803 113 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 HERVK_113P63121 156 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 C9orf47Q6ZRZ4 202 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 RNF152Q8N8N0 203 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 NAV2Q8IVL1 2488 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 SIRPDQ9H106 197 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 PLXNB1O43157 2135 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 IGKV1D-37A0A075B6S9 117 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 IGHV3-38A0A0C4DH36 116 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 EIF4EBP1Q13541 118 aaPredicted RBP9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 Q6ZVH6 145 aa9.19□□□□□ -0.94
DEPDC1-201ENST00000370966 CTRLP40313 264 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 DEFB125Q8N687 156 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 ZNF503Q96F45 646 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 C19orf71A6NCJ1 209 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 IGHG2P01859 326 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 CCDC168Q8NDH2 2452 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 TMEM89A2RUT3 159 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 CFHR3Q02985 330 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 DEFB113Q30KQ7 82 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 MYO9AB2RTY4 2548 aa9.18□□□□□ -0.94
DEPDC1-201ENST00000370966 PPDPFLQ8WWR9 84 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 VWC2LB2RUY7 222 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 INAFM2P0DMQ5 153 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 APOC4P55056 127 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 C3orf56Q8N813 242 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 IGF2RP11717 2491 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 F5H768 121 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 LAMTOR3Q9UHA4 124 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 FGF6P10767 208 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 PIEZO2Q9H5I5 2752 aa9.17□□□□□ -0.94
DEPDC1-201ENST00000370966 C2CD3Q4AC94 2353 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 PCP2Q8IVA1 136 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 CCL24O00175 119 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 SPINK8P0C7L1 97 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 C12orf74Q32Q52 190 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
DEPDC1-201ENST00000370966 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
DEPDC1-201ENST00000370966 U3KQE9 123 aa9.15□□□□□ -0.94
DEPDC1-201ENST00000370966 GAGE6Q13070 117 aa9.15□□□□□ -0.94
DEPDC1-201ENST00000370966 TDRG1Q3Y452 100 aa9.15□□□□□ -0.94
DEPDC1-201ENST00000370966 TNRC6AQ8NDV7 1962 aaKnown RBP9.15□□□□□ -0.95
DEPDC1-201ENST00000370966 ANKRD39Q53RE8 183 aa9.15□□□□□ -0.95
DEPDC1-201ENST00000370966 H3BMM0 161 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 ODF3BA8MYP8 253 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 RPL39LQ96EH5 51 aaKnown RBP9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 PFN2P35080 140 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
DEPDC1-201ENST00000370966 FRMD6-AS1P0C7T7 363 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 A0A1B0GXF2 115 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 LMO4P61968 165 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 UTF1Q5T230 341 aa9.13□□□□□ -0.95
DEPDC1-201ENST00000370966 ZFP2Q6ZN57 461 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms