RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 HES1Q14469 280 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
CHD1L-203ENST00000369259 DPM3Q9P2X0 92 aa12.29□□□□□ -0.44
CHD1L-203ENST00000369259 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 J3QQQ9 107 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 PPP1R17O96001 155 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 ARL3P36405 182 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 FAM57AQ8TBR7 257 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 SPRY2O43597 315 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 LGALS3P17931 250 aaKnown RBP12.28□□□□□ -0.44
CHD1L-203ENST00000369259 TP53TG1Q9Y2A0 90 aa12.28□□□□□ -0.44
CHD1L-203ENST00000369259 TRAV2A0A0B4J234 112 aa12.27□□□□□ -0.44
CHD1L-203ENST00000369259 TRBV10-2A0A0K0K1G8 114 aa12.27□□□□□ -0.44
CHD1L-203ENST00000369259 ELANEP08246 267 aa12.27□□□□□ -0.44
CHD1L-203ENST00000369259 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.44
CHD1L-203ENST00000369259 H3BMM0 161 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 LGALS9O00182 355 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 MRPL23Q16540 153 aaKnown RBP12.27□□□□□ -0.45
CHD1L-203ENST00000369259 PRR9Q5T870 116 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 GPHB5Q86YW7 130 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 UBE2WQ96B02 151 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 PRO3102Q9H379 93 aa12.27□□□□□ -0.45
CHD1L-203ENST00000369259 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 TCF15Q12870 199 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 TMEM141Q96I45 108 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 CLEC3BP05452 202 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
CHD1L-203ENST00000369259 Q1RN00 199 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 ZNRF2Q8NHG8 242 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
CHD1L-203ENST00000369259 KALRNO60229 2985 aa12.25□□□□□ -0.45
CHD1L-203ENST00000369259 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
CHD1L-203ENST00000369259 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
CHD1L-203ENST00000369259 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
CHD1L-203ENST00000369259 MUSTN1Q8IVN3 82 aa12.25□□□□□ -0.45
CHD1L-203ENST00000369259 PKDREJQ9NTG1 2253 aa12.24□□□□□ -0.45
CHD1L-203ENST00000369259 CLPSL1A2RUU4 121 aa12.24□□□□□ -0.45
CHD1L-203ENST00000369259 LOC400499M0QZD8 3231 aa12.24□□□□□ -0.45
CHD1L-203ENST00000369259 FOXC1Q12948 553 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 TMEM126AQ9H061 195 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 DCHS1Q96JQ0 3298 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 TECTAO75443 2155 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 ZNF876PQ49A33 203 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 LENEPQ9Y5L5 61 aa12.23□□□□□ -0.45
CHD1L-203ENST00000369259 TRBV30A0A0K0K1B3 111 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 J3KRW8 73 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 IGF1P05019 195 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
CHD1L-203ENST00000369259 C1orf122Q6ZSJ8 110 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 LYNX1G3V0Z9 82 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 LYNX1P0DP58 116 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 C2orf82Q6UX34 121 aa12.22□□□□□ -0.45
CHD1L-203ENST00000369259 BEX4Q9NWD9 120 aaPredicted RBP12.22□□□□□ -0.45
CHD1L-203ENST00000369259 LEPROTO15243 131 aa12.21□□□□□ -0.45
CHD1L-203ENST00000369259 C15orf32Q32M92 178 aa12.21□□□□□ -0.45
CHD1L-203ENST00000369259 POM121L12Q8N7R1 296 aa12.21□□□□□ -0.45
CHD1L-203ENST00000369259 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.46
CHD1L-203ENST00000369259 DEFB109BQ30KR1 87 aa12.21□□□□□ -0.46
CHD1L-203ENST00000369259 CHCHD5Q9BSY4 110 aa12.21□□□□□ -0.46
CHD1L-203ENST00000369259 VPREB3Q9UKI3 123 aa12.21□□□□□ -0.46
CHD1L-203ENST00000369259 IGHV3-49A0A0A0MS15 119 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 CDX4O14627 284 aaPredicted RBP12.2□□□□□ -0.46
CHD1L-203ENST00000369259 TRIAP1O43715 76 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 MED14OSP0DP75 135 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 E7EQL1 145 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 POLR2KP53803 58 aaKnown RBP12.2□□□□□ -0.46
CHD1L-203ENST00000369259 ZNF56Q15929 161 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
CHD1L-203ENST00000369259 ZDBF2Q9HCK1 2354 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 IGHV4OR15-8A0A075B7B6 117 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 A0A087WW49 117 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 C16orf92Q96LL3 132 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 LINC01587Q99440 93 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 H7C423 109 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 LY6G5BQ8NDX9 201 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 METTL26Q96S19 204 aa12.19□□□□□ -0.46
CHD1L-203ENST00000369259 VCYO14598 125 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 LINC00477Q96M19 166 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 RP1L1Q8IWN7 2480 aaPredicted RBP12.18□□□□□ -0.46
CHD1L-203ENST00000369259 TRBV7-7A0A0K0K1E9 115 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 H3BT86 120 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 M0R2P5 195 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
CHD1L-203ENST00000369259 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
CHD1L-203ENST00000369259 WNK2Q9Y3S1 2297 aa12.17□□□□□ -0.46
CHD1L-203ENST00000369259 LINC00315P59091 139 aa12.17□□□□□ -0.46
CHD1L-203ENST00000369259 Q8N6K4 173 aa12.17□□□□□ -0.46
CHD1L-203ENST00000369259 PPDPFQ9H3Y8 114 aa12.17□□□□□ -0.46
CHD1L-203ENST00000369259 ASPMQ8IZT6 3477 aa12.17□□□□□ -0.46
CHD1L-203ENST00000369259 ODF3BA8MYP8 253 aa12.16□□□□□ -0.46
CHD1L-203ENST00000369259 CLEC19AQ6UXS0 136 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms