RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 SCGB3A1Q96QR1 104 aa7.68□□□□□ -1.18
TPM3-209ENST00000368527 MCRIP2Q9BUT9 160 aaKnown RBP7.68□□□□□ -1.18
TPM3-209ENST00000368527 DKK2Q9UBU2 259 aa7.68□□□□□ -1.18
TPM3-209ENST00000368527 HHLA3Q9XRX5 114 aa7.68□□□□□ -1.18
TPM3-209ENST00000368527 LRBAP50851 2863 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 VCYO14598 125 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 PRB1P04280 392 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 IGHV4-31P0DP07 118 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 GATA1P15976 413 aaPredicted RBP7.67□□□□□ -1.18
TPM3-209ENST00000368527 NMUP48645 174 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 DEFB113Q30KQ7 82 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 PIK3CD-AS1Q5SR53 167 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 ADAMTSL5Q6ZMM2 481 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 Q6ZS46 218 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 GTF2H5Q6ZYL4 71 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 ERASQ7Z444 233 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 C14orf178Q8N769 122 aaPredicted RBP7.67□□□□□ -1.18
TPM3-209ENST00000368527 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 CYSLTR1Q9Y271 337 aa7.67□□□□□ -1.18
TPM3-209ENST00000368527 ASH1LQ9NR48 2969 aaKnown RBP7.67□□□□□ -1.18
TPM3-209ENST00000368527 K7EP13 123 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 MGPP08493 103 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 CDKN1BP46527 198 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 C9orf85Q96MD7 179 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 KIR2DL4Q99706 377 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 ZNF702PQ9H963 129 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 KIF25-AS1Q9Y6Z4 181 aa7.66□□□□□ -1.18
TPM3-209ENST00000368527 IGHV1OR15-1A0A075B7D0 117 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 TRAV26-2A0A0B4J265 109 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 C9orf118A6NHY6 69 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 J3KRW8 73 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 CCL25O15444 150 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 GAS8-AS1O95177 125 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 CD7P09564 240 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 FXYD7P58549 80 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 PTH2Q96A98 100 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 JMJD8Q96S16 334 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 MRPL35Q9NZE8 188 aaKnown RBP7.65□□□□□ -1.18
TPM3-209ENST00000368527 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
TPM3-209ENST00000368527 CHTOPQ9Y3Y2 248 aaKnown RBP7.65□□□□□ -1.18
TPM3-209ENST00000368527 IGHV3-16A0A0C4DH30 117 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 A8MTW9 85 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 F6UB75 175 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 GNRH2O43555 120 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 HOXD3P31249 432 aaPredicted RBP7.64□□□□□ -1.19
TPM3-209ENST00000368527 HERVK_113P61574 105 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 RHOHQ15669 191 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 C2orf66Q6UXQ4 117 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 TRPT1Q86TN4 253 aaKnown RBP7.64□□□□□ -1.19
TPM3-209ENST00000368527 NEXN-AS1Q8NBZ9 246 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 TIMM17AQ99595 171 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 CSTL1Q9H114 145 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 EDA2RQ9HAV5 297 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 TMEM160Q9NX00 188 aa7.64□□□□□ -1.19
TPM3-209ENST00000368527 MED13LQ71F56 2210 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 IGKV3-7A0A075B6H7 116 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 TRAV12-3A0A0B4J271 114 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 CBY3A6NI87 242 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 OR11H12B2RN74 326 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 RNF223E7ERA6 249 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 ZNF688P0C7X2 276 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 POLR2KP53803 58 aaKnown RBP7.63□□□□□ -1.19
TPM3-209ENST00000368527 RIPPLY3P57055 190 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 SYNJ2BPP57105 145 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 LINC00315P59091 139 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 OR11H1Q8NG94 326 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 OR11H2Q8NH07 326 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 C4orf3Q8WVX3 66 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 CLUHP3Q96NS8 147 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 LINC00467Q9BRT7 94 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 CHAC1Q9BUX1 264 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 TM2D2Q9BX73 214 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 ZNF256Q9Y2P7 627 aaPredicted RBP7.63□□□□□ -1.19
TPM3-209ENST00000368527 DCHS2Q6V1P9 2916 aa7.63□□□□□ -1.19
TPM3-209ENST00000368527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.63□□□□□ -1.192e-7■■■■□ 20.9
TPM3-209ENST00000368527 HOXA3O43365 443 aaPredicted RBP7.62□□□□□ -1.19
TPM3-209ENST00000368527 TMEM95Q3KNT9 176 aa7.62□□□□□ -1.19
TPM3-209ENST00000368527 Q5PR19 223 aa7.62□□□□□ -1.19
TPM3-209ENST00000368527 PCP2Q8IVA1 136 aa7.62□□□□□ -1.19
TPM3-209ENST00000368527 TACC2O95359 2948 aa7.62□□□□□ -1.19
TPM3-209ENST00000368527 MAST4O15021 2626 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 TRBV25-1A0A075B6N4 114 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 TRAV25A0A0B4J276 109 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 E9PLD3 99 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 F5H697 171 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 SCGB2A2Q13296 93 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 PMVKQ15126 192 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 TCTEX1D4Q5JR98 221 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
TPM3-209ENST00000368527 Q6ZQT7 251 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms