RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 SLC25A29Q8N8R3 303 aa13.78□□□□□ -0.2
PTPA-206ENST00000358994 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
PTPA-206ENST00000358994 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
PTPA-206ENST00000358994 DUSP14O95147 198 aaKnown RBP13.78□□□□□ -0.2
PTPA-206ENST00000358994 DEFB109BQ30KR1 87 aa13.78□□□□□ -0.2
PTPA-206ENST00000358994 M0R381 172 aa13.77□□□□□ -0.2
PTPA-206ENST00000358994 TSHBP01222 138 aa13.77□□□□□ -0.2
PTPA-206ENST00000358994 PRR9Q5T870 116 aa13.77□□□□□ -0.2
PTPA-206ENST00000358994 RAX2Q96IS3 184 aa13.77□□□□□ -0.2
PTPA-206ENST00000358994 HERV-K104P63124 156 aa13.77□□□□□ -0.21
PTPA-206ENST00000358994 DPM3Q9P2X0 92 aa13.77□□□□□ -0.21
PTPA-206ENST00000358994 EIF4EBP3O60516 100 aaPredicted RBP13.77□□□□□ -0.21
PTPA-206ENST00000358994 PIP4P1Q86T03 277 aa13.77□□□□□ -0.21
PTPA-206ENST00000358994 C14orf178Q8N769 122 aaPredicted RBP13.77□□□□□ -0.21
PTPA-206ENST00000358994 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
PTPA-206ENST00000358994 ZFAND3Q9H8U3 227 aa13.77□□□□□ -0.21
PTPA-206ENST00000358994 M0QXV9 152 aa13.76□□□□□ -0.21
PTPA-206ENST00000358994 NBL1P41271 181 aa13.76□□□□□ -0.21
PTPA-206ENST00000358994 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
PTPA-206ENST00000358994 SCGB2A1O75556 95 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 IFITM1P13164 125 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 HERVK_113P61574 105 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 TTC32Q5I0X7 151 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 Q8N1Y9 231 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 SMIM20Q8N5G0 67 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 RPL32P62910 135 aaKnown RBP13.75□□□□□ -0.21
PTPA-206ENST00000358994 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
PTPA-206ENST00000358994 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
PTPA-206ENST00000358994 IGF1P05019 195 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 C9orf47Q6ZRZ4 202 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 AMELXQ99217 191 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 MGAQ8IWI9 3026 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 CLPSL1A2RUU4 121 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 E7EQL1 145 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
PTPA-206ENST00000358994 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 MGPP08493 103 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 PLA2G2CQ5R387 149 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 A4D1N5 150 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 J3KRW8 73 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 IGHV3-33P01772 117 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 DEFB104AQ8WTQ1 72 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 HIF1ANQ9NWT6 349 aa13.73□□□□□ -0.21
PTPA-206ENST00000358994 ODF3Q96PU9 254 aa13.72□□□□□ -0.21
PTPA-206ENST00000358994 ELANEP08246 267 aa13.72□□□□□ -0.21
PTPA-206ENST00000358994 PAPPA-AS1Q5QFB9 102 aa13.72□□□□□ -0.21
PTPA-206ENST00000358994 Q6Q795 121 aa13.72□□□□□ -0.21
PTPA-206ENST00000358994 GPHB5Q86YW7 130 aa13.72□□□□□ -0.21
PTPA-206ENST00000358994 A0A0G2JNJ9 132 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 H7C2G1 150 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 CLEC3BP05452 202 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 Q9UFV3 132 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 TP53TG1Q9Y2A0 90 aa13.71□□□□□ -0.21
PTPA-206ENST00000358994 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.22
PTPA-206ENST00000358994 FAM159AQ6UWV7 190 aa13.71□□□□□ -0.22
PTPA-206ENST00000358994 TMEM263Q8WUH6 116 aaKnown RBP13.71□□□□□ -0.22
PTPA-206ENST00000358994 ABCA4P78363 2273 aa13.71□□□□□ -0.22
PTPA-206ENST00000358994 IGF2RP11717 2491 aa13.71□□□□□ -0.22
PTPA-206ENST00000358994 PMVKQ15126 192 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 C15orf32Q32M92 178 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 ZNRF2Q8NHG8 242 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 TEX49A0A1B0GTD5 131 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 DEFB124Q8NES8 71 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 MRPL53Q96EL3 112 aaKnown RBP13.7□□□□□ -0.22
PTPA-206ENST00000358994 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
PTPA-206ENST00000358994 J3QQQ9 107 aa13.69□□□□□ -0.22
PTPA-206ENST00000358994 RPL39P62891 51 aaKnown RBP13.69□□□□□ -0.22
PTPA-206ENST00000358994 FAM57AQ8TBR7 257 aa13.69□□□□□ -0.22
PTPA-206ENST00000358994 P0DMU3 169 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 FAM231AP0DMU4 169 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 FAM231CP0DMU5 169 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 S100A4P26447 101 aaKnown RBP13.68□□□□□ -0.22
PTPA-206ENST00000358994 C15orf53Q8NAA6 179 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 PHLDA3Q9Y5J5 127 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 IGHV7-81A0A0B4J1V7 117 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 IGHV1-69DA0A0B4J2H0 117 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 LINC01620Q4KN68 170 aa13.68□□□□□ -0.22
PTPA-206ENST00000358994 LY6G5BQ8NDX9 201 aa13.67□□□□□ -0.22
PTPA-206ENST00000358994 TRAV8-4A0A0B4J246 113 aa13.67□□□□□ -0.22
PTPA-206ENST00000358994 ARL3P36405 182 aa13.67□□□□□ -0.22
PTPA-206ENST00000358994 ATMQ13315 3056 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 MUC4Q99102 2169 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 LGALS3P17931 250 aaKnown RBP13.66□□□□□ -0.22
PTPA-206ENST00000358994 RPL13AP40429 203 aaKnown RBP13.66□□□□□ -0.22
PTPA-206ENST00000358994 ZFAND2AQ8N6M9 145 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 A0A0B4J2C4 111 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 IGHV4-39P01824 125 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 ATXN8Q156A1 80 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 Q8N6K4 173 aa13.66□□□□□ -0.22
PTPA-206ENST00000358994 APC2O95996 2303 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 CLEC19AQ6UXS0 136 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 C20orf173Q96LM9 149 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 CCDC140Q96MF4 163 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 TRAV2A0A0B4J234 112 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 ZNF876PQ49A33 203 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 MUSTN1Q8IVN3 82 aa13.65□□□□□ -0.22
PTPA-206ENST00000358994 LINC01600Q96MT4 127 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms