RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 C10orf99Q6UWK7 81 aa16.69■□□□□ 0.26
NKX2-1-201ENST00000354822 CSPG4Q6UVK1 2322 aa16.68■□□□□ 0.26
NKX2-1-201ENST00000354822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.68■□□□□ 0.26
NKX2-1-201ENST00000354822 LGALS1P09382 135 aaKnown RBP16.68■□□□□ 0.26
NKX2-1-201ENST00000354822 IGHV4-31P0DP07 118 aa16.68■□□□□ 0.26
NKX2-1-201ENST00000354822 A0A087WX48 190 aa16.67■□□□□ 0.26
NKX2-1-201ENST00000354822 PCP2Q8IVA1 136 aa16.67■□□□□ 0.26
NKX2-1-201ENST00000354822 SELENOKQ9Y6D0 94 aa16.67■□□□□ 0.26
NKX2-1-201ENST00000354822 MGPP08493 103 aa16.67■□□□□ 0.26
NKX2-1-201ENST00000354822 UBE2E2Q96LR5 201 aa16.67■□□□□ 0.26
NKX2-1-201ENST00000354822 TRAV12-1A0A0B4J245 112 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 C7orf71A4D174 169 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 A6NDN8 102 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 SPRY2O43597 315 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 ADAMTSL5Q6ZMM2 481 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 TOMM6Q96B49 74 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 FAM208BQ5VWN6 2430 aa16.66■□□□□ 0.26
NKX2-1-201ENST00000354822 K7EQG2 157 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 HLA-DRB4P13762 266 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 FOSL1P15407 271 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 TCTAP57738 103 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 Q5PR19 223 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 HLA-DRB4X5D2U9 266 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 ZNF702PQ9H963 129 aa16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 UTP20O75691 2785 aaKnown RBP16.65■□□□□ 0.26
NKX2-1-201ENST00000354822 A0A0J9YX75 114 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 ZNF688P0C7X2 276 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 PLNP26678 52 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 RNF152Q8N8N0 203 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 RPL39LQ96EH5 51 aaKnown RBP16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 TMEM160Q9NX00 188 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 MRPL35Q9NZE8 188 aaKnown RBP16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 HIGD1BQ9P298 99 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 CR1P17927 2039 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 ANKRD17O75179 2603 aaKnown RBP16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 IGHV4OR15-8A0A075B7B6 117 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 A0A087WW49 117 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 CBY3A6NI87 242 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 ZC2HC1BQ5TFG8 222 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 KIF25-AS1Q9Y6Z4 181 aa16.64■□□□□ 0.25
NKX2-1-201ENST00000354822 TRAV12-3A0A0B4J271 114 aa16.63■□□□□ 0.25
NKX2-1-201ENST00000354822 SYNJ2BPP57105 145 aa16.63■□□□□ 0.25
NKX2-1-201ENST00000354822 RPL32P62910 135 aaKnown RBP16.63■□□□□ 0.25
NKX2-1-201ENST00000354822 SCGB3A1Q96QR1 104 aa16.63■□□□□ 0.25
NKX2-1-201ENST00000354822 H7C1H1 209 aa16.62■□□□□ 0.25
NKX2-1-201ENST00000354822 CD7P09564 240 aa16.62■□□□□ 0.25
NKX2-1-201ENST00000354822 CELSR2Q9HCU4 2923 aa16.62■□□□□ 0.25
NKX2-1-201ENST00000354822 DUSP14O95147 198 aaKnown RBP16.62■□□□□ 0.25
NKX2-1-201ENST00000354822 LINC00315P59091 139 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 OR4C5Q8NGB2 326 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 IGKV2D-26A0A0A0MRZ7 120 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 LINC01549A6NIU2 74 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 H3BRM9 83 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 GTSCR1Q86UQ5 136 aa16.61■□□□□ 0.25
NKX2-1-201ENST00000354822 F8VRH5 84 aa16.6■□□□□ 0.25
NKX2-1-201ENST00000354822 HOXA3O43365 443 aaPredicted RBP16.6■□□□□ 0.25
NKX2-1-201ENST00000354822 HOXD3P31249 432 aaPredicted RBP16.6■□□□□ 0.25
NKX2-1-201ENST00000354822 Q96MF0 132 aa16.6■□□□□ 0.25
NKX2-1-201ENST00000354822 CSTL1Q9H114 145 aa16.6■□□□□ 0.25
NKX2-1-201ENST00000354822 FBN2P35556 2912 aa16.59■□□□□ 0.25
NKX2-1-201ENST00000354822 CDKN1BP46527 198 aa16.59■□□□□ 0.25
NKX2-1-201ENST00000354822 WFDC12Q8WWY7 111 aa16.59■□□□□ 0.25
NKX2-1-201ENST00000354822 CRYBG3Q68DQ2 2970 aa16.59■□□□□ 0.25
NKX2-1-201ENST00000354822 C2orf66Q6UXQ4 117 aa16.58■□□□□ 0.25
NKX2-1-201ENST00000354822 LRRK2Q5S007 2527 aa16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 AMMECR1LQ6DCA0 310 aa16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 SYT8Q8NBV8 401 aa16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 NEXN-AS1Q8NBZ9 246 aa16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 C9orf85Q96MD7 179 aa16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 MAP1AP78559 2803 aaPredicted RBP16.58■□□□□ 0.24
NKX2-1-201ENST00000354822 IGHV3-16A0A0C4DH30 117 aa16.57■□□□□ 0.24
NKX2-1-201ENST00000354822 FOXI2Q6ZQN5 318 aa16.57■□□□□ 0.24
NKX2-1-201ENST00000354822 ERASQ7Z444 233 aa16.57■□□□□ 0.24
NKX2-1-201ENST00000354822 CHTOPQ9Y3Y2 248 aaKnown RBP16.57■□□□□ 0.24
NKX2-1-201ENST00000354822 MUC4Q99102 2169 aa16.57■□□□□ 0.24
NKX2-1-201ENST00000354822 Q8N2B8 174 aa16.56■□□□□ 0.24
NKX2-1-201ENST00000354822 C9orf118A6NHY6 69 aa16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 KRTAP1-3Q8IUG1 177 aa16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 PRRC2AP48634 2157 aaKnown RBP16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 IGHV1OR15-1A0A075B7D0 117 aa16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 VCYO14598 125 aa16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 SUMO4Q6EEV6 95 aa16.55■□□□□ 0.24
NKX2-1-201ENST00000354822 TRBV25-1A0A075B6N4 114 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 K7EP13 123 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 IGKV3-20P01619 116 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 POLR2KP53803 58 aaKnown RBP16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 TRAV8-6A0A0B4J262 113 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 TCTEX1D4Q5JR98 221 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 DUX5Q96PT3 197 aa16.54■□□□□ 0.24
NKX2-1-201ENST00000354822 TRAV12-2A0A075B6T6 113 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 F5H697 171 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 BAALCQ8WXS3 180 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 CHAC1Q9BUX1 264 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 JPT2Q9H910 190 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 CYSLTR1Q9Y271 337 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 USP9YO00507 2555 aaPredicted RBP16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 KIR2DL4Q99706 377 aa16.53■□□□□ 0.24
NKX2-1-201ENST00000354822 EPG5Q9HCE0 2579 aa16.52■□□□□ 0.24
NKX2-1-201ENST00000354822 TRBV6-5A0A0K0K1A5 114 aa16.52■□□□□ 0.24
NKX2-1-201ENST00000354822 SPINK13Q1W4C9 94 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms