RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MRPL35Q9NZE8 188 aaKnown RBP16.06■□□□□ 0.16
CCDC38-201ENST00000344280 TRAV8-6A0A0B4J262 113 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 MGPP08493 103 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 SLC25A16P16260 332 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 AMMECR1LQ6DCA0 310 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 OR9G4Q8NGQ1 327 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 MYOZ3Q8TDC0 251 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 KLLNB2CW77 178 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 RNF223E7ERA6 249 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 SUMO2P61956 95 aaKnown RBP16.05■□□□□ 0.16
CCDC38-201ENST00000344280 TMEM160Q9NX00 188 aa16.05■□□□□ 0.16
CCDC38-201ENST00000344280 ATP5LO75964 103 aa16.04■□□□□ 0.16
CCDC38-201ENST00000344280 ZC2HC1BQ5TFG8 222 aa16.04■□□□□ 0.16
CCDC38-201ENST00000344280 CREBBPQ92793 2442 aa16.04■□□□□ 0.16
CCDC38-201ENST00000344280 DPM2O94777 84 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 AGRNO00468 2067 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 SIVA1O15304 175 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 SEC11AP67812 179 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 OR4C5Q8NGB2 326 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 RNASE8Q8TDE3 154 aaKnown RBP16.03■□□□□ 0.16
CCDC38-201ENST00000344280 ZNF580Q9UK33 172 aa16.03■□□□□ 0.16
CCDC38-201ENST00000344280 ZNF469Q96JG9 3925 aaPredicted RBP16.03■□□□□ 0.16
CCDC38-201ENST00000344280 TRBV7-9A0A0J9YWB2 115 aa16.02■□□□□ 0.16
CCDC38-201ENST00000344280 ZNF688P0C7X2 276 aa16.02■□□□□ 0.16
CCDC38-201ENST00000344280 JPT2Q9H910 190 aa16.02■□□□□ 0.16
CCDC38-201ENST00000344280 HSD52Q0P140 79 aa16.02■□□□□ 0.15
CCDC38-201ENST00000344280 BBC3Q96PG8 261 aaPredicted RBP16.02■□□□□ 0.15
CCDC38-201ENST00000344280 MED14OSP0DP75 135 aa16.01■□□□□ 0.15
CCDC38-201ENST00000344280 TRAV12-3A0A0B4J271 114 aa16.01■□□□□ 0.15
CCDC38-201ENST00000344280 ID1P41134 155 aa16.01■□□□□ 0.15
CCDC38-201ENST00000344280 NAV2Q8IVL1 2488 aa16■□□□□ 0.15
CCDC38-201ENST00000344280 IGKV3-20P01619 116 aa16■□□□□ 0.15
CCDC38-201ENST00000344280 PSMG4Q5JS54 123 aa16■□□□□ 0.15
CCDC38-201ENST00000344280 TEX15Q9BXT5 2789 aa16■□□□□ 0.15
CCDC38-201ENST00000344280 A0A087WX48 190 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 NEGR1Q7Z3B1 354 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 AP1S3Q96PC3 154 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 DUX5Q96PT3 197 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 UBR5O95071 2799 aaPredicted RBP15.99■□□□□ 0.15
CCDC38-201ENST00000344280 LINC00315P59091 139 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 DEFB104AQ8WTQ1 72 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 C20orf78Q9BR46 151 aa15.99■□□□□ 0.15
CCDC38-201ENST00000344280 NAA38Q9BRA0 125 aaKnown RBP15.99■□□□□ 0.15
CCDC38-201ENST00000344280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.98■□□□□ 0.15
CCDC38-201ENST00000344280 SYNJ2BPP57105 145 aa15.98■□□□□ 0.15
CCDC38-201ENST00000344280 KRTAP10-9P60411 292 aa15.98■□□□□ 0.15
CCDC38-201ENST00000344280 FAM159AQ6UWV7 190 aa15.98■□□□□ 0.15
CCDC38-201ENST00000344280 KIF25-AS1Q9Y6Z4 181 aa15.98■□□□□ 0.15
CCDC38-201ENST00000344280 TRAV12-2A0A075B6T6 113 aa15.98■□□□□ 0.15
CCDC38-201ENST00000344280 NXPH4O95158 308 aa15.97■□□□□ 0.15
CCDC38-201ENST00000344280 TOMM6Q96B49 74 aa15.97■□□□□ 0.15
CCDC38-201ENST00000344280 CD7P09564 240 aa15.97■□□□□ 0.15
CCDC38-201ENST00000344280 ORMDL2Q53FV1 153 aa15.97■□□□□ 0.15
CCDC38-201ENST00000344280 IGHV4OR15-8A0A075B7B6 117 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 NBPF19A0A087WUL8 3843 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 A0A087WW49 117 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 SCGB3A1Q96QR1 104 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 JMJD8Q96S16 334 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 VPREB3Q9UKI3 123 aa15.96■□□□□ 0.15
CCDC38-201ENST00000344280 A0A087WWL8 130 aa15.96■□□□□ 0.14
CCDC38-201ENST00000344280 J3QLI3 93 aa15.96■□□□□ 0.14
CCDC38-201ENST00000344280 COX6B1P14854 86 aa15.96■□□□□ 0.14
CCDC38-201ENST00000344280 MAPKAPK5-AS1Q8N8E1 139 aa15.96■□□□□ 0.14
CCDC38-201ENST00000344280 TRBV25-1A0A075B6N4 114 aa15.95■□□□□ 0.14
CCDC38-201ENST00000344280 A6NDN8 102 aa15.95■□□□□ 0.14
CCDC38-201ENST00000344280 RAB37Q96AX2 223 aa15.95■□□□□ 0.14
CCDC38-201ENST00000344280 CSTL1Q9H114 145 aa15.95■□□□□ 0.14
CCDC38-201ENST00000344280 BEX4Q9NWD9 120 aaPredicted RBP15.95■□□□□ 0.14
CCDC38-201ENST00000344280 C2orf66Q6UXQ4 117 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 POM121L12Q8N7R1 296 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 ZNF702PQ9H963 129 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 CR1P17927 2039 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 MYO9AB2RTY4 2548 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 A0A0J9YX75 114 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 H3BRM9 83 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 CHAC1Q9BUX1 264 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 TLN2Q9Y4G6 2542 aa15.94■□□□□ 0.14
CCDC38-201ENST00000344280 K7EQG2 157 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 IGHV4-31P0DP07 118 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 FXYD2P54710 66 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 MDFICQ9P1T7 246 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 TMEM89A2RUT3 159 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 H3BUT2 72 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 HOXA3O43365 443 aaPredicted RBP15.93■□□□□ 0.14
CCDC38-201ENST00000344280 Q6YL49 198 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 NEXN-AS1Q8NBZ9 246 aa15.93■□□□□ 0.14
CCDC38-201ENST00000344280 C9orf118A6NHY6 69 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 F8VRH5 84 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 FSHBP01225 129 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 LGALS1P09382 135 aaKnown RBP15.92■□□□□ 0.14
CCDC38-201ENST00000344280 GCSHP23434 173 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 HOXD3P31249 432 aaPredicted RBP15.92■□□□□ 0.14
CCDC38-201ENST00000344280 TRAV12-1A0A0B4J245 112 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 H7C1H1 209 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 SNRPD3P62318 126 aaKnown RBP15.92■□□□□ 0.14
CCDC38-201ENST00000344280 SAMD13Q5VXD3 122 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 SUMO4Q6EEV6 95 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 C18orf65Q6ZTR6 163 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 HIGD1BQ9P298 99 aa15.92■□□□□ 0.14
CCDC38-201ENST00000344280 PLNP26678 52 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms