RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.26
NECAP1-201ENST00000339754 ROS1P08922 2347 aa7.15□□□□□ -1.27
NECAP1-201ENST00000339754 TEX49A0A1B0GTD5 131 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 P0DMU3 169 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 RPL13AP40429 203 aaKnown RBP7.14□□□□□ -1.27
NECAP1-201ENST00000339754 EMP1P54849 157 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 TIMD4Q96H15 378 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 SPANXA1Q9NS26 97 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 MDFICQ9P1T7 246 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 GVINP1Q7Z2Y8 2422 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 CEP250Q9BV73 2442 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 A4D1N5 150 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 DUSP14O95147 198 aaKnown RBP7.14□□□□□ -1.27
NECAP1-201ENST00000339754 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 NPBQ8NG41 125 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 IGFBPL1Q8WX77 278 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 IGHV3-35A0A0C4DH35 117 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 SPRY2O43597 315 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 BUB3O43684 328 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 HERVK_113P61574 105 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 LINC01620Q4KN68 170 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 IGFL3Q6UXB1 125 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 OR10J6PQ8NGY7 276 aa7.14□□□□□ -1.27
NECAP1-201ENST00000339754 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 IGIPA6NJ69 53 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 PAPPA-AS1Q5QFB9 102 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 GPHB5Q86YW7 130 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
NECAP1-201ENST00000339754 NDPQ00604 133 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 FOXC1Q12948 553 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 FAM57AQ8TBR7 257 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 HIF1ANQ9NWT6 349 aa7.13□□□□□ -1.27
NECAP1-201ENST00000339754 LGALS9O00182 355 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 PRR9Q5T870 116 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 C9orf47Q6ZRZ4 202 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 M0R381 172 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 PMVKQ15126 192 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 ATXN8Q156A1 80 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 RNASE6Q93091 150 aaKnown RBP7.12□□□□□ -1.27
NECAP1-201ENST00000339754 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
NECAP1-201ENST00000339754 PTPRZ1P23471 2315 aaPredicted RBP7.11□□□□□ -1.27
NECAP1-201ENST00000339754 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 IGHV3-66A0A0C4DH42 116 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 H7C2G1 150 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 J3QQQ9 107 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 VPREB3Q9UKI3 123 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 TACC2O95359 2948 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 ATMQ13315 3056 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 TRAV2A0A0B4J234 112 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 IGHV1-69DA0A0B4J2H0 117 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 IGF1P05019 195 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 BSPH1Q075Z2 132 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 MUSTN1Q8IVN3 82 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 LINC01587Q99440 93 aa7.11□□□□□ -1.27
NECAP1-201ENST00000339754 CLPSL1A2RUU4 121 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 IGHV4-39P01824 125 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 CLEC3BP05452 202 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 MRPL23Q16540 153 aaKnown RBP7.1□□□□□ -1.27
NECAP1-201ENST00000339754 TMEM170BQ5T4T1 132 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 TP53TG1Q9Y2A0 90 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 SPTBN2O15020 2390 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 CSMD1Q96PZ7 3565 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 C1orf122Q6ZSJ8 110 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 MRPL53Q96EL3 112 aaKnown RBP7.1□□□□□ -1.27
NECAP1-201ENST00000339754 CHCHD5Q9BSY4 110 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
NECAP1-201ENST00000339754 PKDREJQ9NTG1 2253 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 H3BMM0 161 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 ZNF876PQ49A33 203 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 UBE2WQ96B02 151 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 TMEM126AQ9H061 195 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 DPM3Q9P2X0 92 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 BSNQ9UPA5 3926 aa7.09□□□□□ -1.27
NECAP1-201ENST00000339754 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 TRBV30A0A0K0K1B3 111 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 SCGB2A1O75556 95 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 MGPP08493 103 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 LGALS3P17931 250 aaKnown RBP7.09□□□□□ -1.28
NECAP1-201ENST00000339754 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.28
NECAP1-201ENST00000339754 POM121L12Q8N7R1 296 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 TMEM141Q96I45 108 aa7.09□□□□□ -1.28
NECAP1-201ENST00000339754 TRIAP1O43715 76 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 ARL3P36405 182 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 HES1Q14469 280 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 C3orf56Q8N813 242 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 LYNX1G3V0Z9 82 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 H7C423 109 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 PPP1R17O96001 155 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 LYNX1P0DP58 116 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 POLR2KP53803 58 aaKnown RBP7.08□□□□□ -1.28
NECAP1-201ENST00000339754 LINC00315P59091 139 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
NECAP1-201ENST00000339754 ANKRD11Q6UB99 2663 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms