RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TMEM208Q9BTX3 173 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
CBX3-201ENST00000337620 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 PRM2P04554 102 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 DNLZQ5SXM8 178 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 MDFIQ99750 246 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 MDFICQ9P1T7 246 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 ANK2Q01484 3957 aa10.74□□□□□ -0.69
CBX3-201ENST00000337620 M0R381 172 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 S100A6P06703 90 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 LINC00518Q8N0U6 118 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 C20orf144Q9BQM9 153 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 MED14OSP0DP75 135 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 CACNG7P62955 275 aa10.73□□□□□ -0.69
CBX3-201ENST00000337620 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
CBX3-201ENST00000337620 NDUFA6P56556 154 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 MORN3Q6PF18 240 aaPredicted RBP10.72□□□□□ -0.69
CBX3-201ENST00000337620 SCRT2Q9NQ03 307 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 LINC00469Q8N7U9 141 aa10.72□□□□□ -0.69
CBX3-201ENST00000337620 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
CBX3-201ENST00000337620 C1QTNF4Q9BXJ3 329 aa10.71□□□□□ -0.69
CBX3-201ENST00000337620 IGHV4-4A0A075B6R2 117 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 S100A12P80511 92 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 DMRTA1Q5VZB9 504 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 TMEM256Q8N2U0 113 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 CSTL1Q9H114 145 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 SRIP30626 198 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 SNRPEP62304 92 aaKnown RBP10.7□□□□□ -0.7
CBX3-201ENST00000337620 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
CBX3-201ENST00000337620 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
CBX3-201ENST00000337620 EVI2AP22794 236 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 KRTAP10-11P60412 298 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 FAM104BQ5XKR9 115 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 C9orf85Q96MD7 179 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 GOLT1BQ9Y3E0 138 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 LINC00467Q9BRT7 94 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 MUC4Q99102 2169 aa10.69□□□□□ -0.7
CBX3-201ENST00000337620 G3V4G9 280 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 AZU1P20160 251 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 ALKBH7Q9BT30 221 aaPredicted RBP10.67□□□□□ -0.7
CBX3-201ENST00000337620 GSN-AS1Q9NRJ2 163 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 ZNF415Q09FC8 603 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 EGFEM1PQ0D2K5 195 aa10.67□□□□□ -0.7
CBX3-201ENST00000337620 C5orf52A6NGY3 159 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
CBX3-201ENST00000337620 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
CBX3-201ENST00000337620 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 RCHY1Q96PM5 261 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 NXPH4O95158 308 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 RAB4AP20338 218 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 RNF185Q96GF1 192 aa10.66□□□□□ -0.7
CBX3-201ENST00000337620 D6R8Y8 96 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 IGHV4-30-4P0DP06 118 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 BAGE3Q86Y29 109 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 AP1S3Q96PC3 154 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 JPT2Q9H910 190 aa10.65□□□□□ -0.7
CBX3-201ENST00000337620 CKS2P33552 79 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 APOC4P55056 127 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 IQCJQ1A5X6 159 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
CBX3-201ENST00000337620 NCR2O95944 276 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 Q0VG73 95 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 PDZD11Q5EBL8 140 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 ZNF705AQ6ZN79 300 aaPredicted RBP10.63□□□□□ -0.71
CBX3-201ENST00000337620 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 C18orf32Q8TCD1 76 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 A0A087WWL8 130 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 KIR2DL5BA0A0G2JN68 375 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 KIR2DL5BA0A0G2JPC4 375 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 M0R2P5 195 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 MGPP08493 103 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 HOXA5P20719 270 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 KIR2DL5AQ8N109 375 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 KIR2DL5BQ8NHK3 375 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
CBX3-201ENST00000337620 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 SPXQ9BT56 116 aa10.63□□□□□ -0.71
CBX3-201ENST00000337620 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
CBX3-201ENST00000337620 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
CBX3-201ENST00000337620 SAMD5Q5TGI4 173 aa10.62□□□□□ -0.71
CBX3-201ENST00000337620 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
CBX3-201ENST00000337620 TRAV26-2A0A0B4J265 109 aa10.61□□□□□ -0.71
CBX3-201ENST00000337620 FAM74A4Q5TZK3 123 aa10.61□□□□□ -0.71
CBX3-201ENST00000337620 U3KQK5 164 aa10.61□□□□□ -0.71
CBX3-201ENST00000337620 UBE2CO00762 179 aa10.61□□□□□ -0.71
CBX3-201ENST00000337620 GAS8-AS1O95177 125 aa10.61□□□□□ -0.71
CBX3-201ENST00000337620 NBEAL2Q6ZNJ1 2754 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1854.6 ms