RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 IMMP2LQ96T52 175 aa15.46■□□□□ 0.07
TPM1-204ENST00000334895 NAT8BQ9UHF3 227 aa15.46■□□□□ 0.07
TPM1-204ENST00000334895 MUC21A0A0G2JKD1 596 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 MUC21A0A140T8X8 626 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 A0A1W2PPQ1 181 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 OR5AL1P0C617 328 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 MED14OSP0DP75 135 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 ZNF415Q09FC8 603 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 ZNF493Q6ZR52 646 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 Q8NAQ8 132 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 C16orf74Q96GX8 76 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 URGCP-MRPS24S4R325 110 aa15.46■□□□□ 0.06
TPM1-204ENST00000334895 OR10AG1Q8NH19 301 aa15.45■□□□□ 0.06
TPM1-204ENST00000334895 IGHV4-28A0A0C4DH34 117 aa15.44■□□□□ 0.06
TPM1-204ENST00000334895 CXorf65A6NEN9 183 aa15.44■□□□□ 0.06
TPM1-204ENST00000334895 B9D2Q9BPU9 175 aa15.44■□□□□ 0.06
TPM1-204ENST00000334895 MIFP14174 115 aa15.43■□□□□ 0.06
TPM1-204ENST00000334895 SPATA25Q9BR10 227 aa15.43■□□□□ 0.06
TPM1-204ENST00000334895 YPEL4Q96NS1 127 aa15.43■□□□□ 0.06
TPM1-204ENST00000334895 CNFNQ9BYD5 112 aa15.43■□□□□ 0.06
TPM1-204ENST00000334895 SMCO4Q9NRQ5 59 aa15.43■□□□□ 0.06
TPM1-204ENST00000334895 F2Z2F3 143 aa15.42■□□□□ 0.06
TPM1-204ENST00000334895 DEFB4AO15263 64 aa15.42■□□□□ 0.06
TPM1-204ENST00000334895 SPINK4O60575 86 aa15.42■□□□□ 0.06
TPM1-204ENST00000334895 TGP01266 2768 aa15.41■□□□□ 0.06
TPM1-204ENST00000334895 SSTP61278 116 aa15.41■□□□□ 0.06
TPM1-204ENST00000334895 ELOBQ15370 118 aa15.41■□□□□ 0.06
TPM1-204ENST00000334895 KCNIP4Q6PIL6 250 aa15.41■□□□□ 0.06
TPM1-204ENST00000334895 PHLDA3Q9Y5J5 127 aa15.41■□□□□ 0.06
TPM1-204ENST00000334895 NXPH4O95158 308 aa15.4■□□□□ 0.06
TPM1-204ENST00000334895 S100PP25815 95 aa15.4■□□□□ 0.06
TPM1-204ENST00000334895 EMP1P54849 157 aa15.4■□□□□ 0.06
TPM1-204ENST00000334895 SNURFLB1AK76 121 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 DAZ2Q13117 558 aaKnown RBP15.39■□□□□ 0.05
TPM1-204ENST00000334895 DMRTA1Q5VZB9 504 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 SPXQ9BT56 116 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 NOP10Q9NPE3 64 aaKnown RBP15.39■□□□□ 0.05
TPM1-204ENST00000334895 MSRB1Q9NZV6 116 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 IGHV4-4A0A075B6R2 117 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 A0A1B0GUT8 65 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 M0R381 172 aa15.39■□□□□ 0.05
TPM1-204ENST00000334895 COL7A1Q02388 2944 aa15.38■□□□□ 0.05
TPM1-204ENST00000334895 TGIF2-C20orf24A0A0A6YYL0 155 aa15.38■□□□□ 0.05
TPM1-204ENST00000334895 M0R2P5 195 aa15.38■□□□□ 0.05
TPM1-204ENST00000334895 NTF3P20783 257 aa15.38■□□□□ 0.05
TPM1-204ENST00000334895 MRPL54Q6P161 138 aaKnown RBP15.38■□□□□ 0.05
TPM1-204ENST00000334895 ZMAT4Q9H898 229 aa15.38■□□□□ 0.05
TPM1-204ENST00000334895 MRPL16Q9NX20 251 aaKnown RBP15.38■□□□□ 0.05
TPM1-204ENST00000334895 TRAV9-1A0A075B6T8 112 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 A0A1B0GXF2 115 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 CACNG7P62955 275 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 SPANXN1Q5VSR9 72 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 WDR73Q6P4I2 378 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 ZFP82Q8N141 532 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 BTF3L4Q96K17 158 aa15.37■□□□□ 0.05
TPM1-204ENST00000334895 ZNF876PQ49A33 203 aa15.36■□□□□ 0.05
TPM1-204ENST00000334895 Q6ZTI0 123 aa15.36■□□□□ 0.05
TPM1-204ENST00000334895 PTH2Q96A98 100 aa15.36■□□□□ 0.05
TPM1-204ENST00000334895 RASL10AQ92737 203 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 TRBV24-1A0A075B6N3 115 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 TRGV1A0A0A0MS02 117 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 TWIST1Q15672 202 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 BORCS7Q96B45 105 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 JPT2Q9H910 190 aa15.35■□□□□ 0.05
TPM1-204ENST00000334895 NHLRC4P0CG21 123 aaPredicted RBP15.34■□□□□ 0.05
TPM1-204ENST00000334895 RIGQ13278 110 aa15.34■□□□□ 0.05
TPM1-204ENST00000334895 LGALS9BQ3B8N2 356 aa15.34■□□□□ 0.05
TPM1-204ENST00000334895 ATP5L2Q7Z4Y8 100 aa15.34■□□□□ 0.05
TPM1-204ENST00000334895 C11orf68Q9H3H3 251 aaKnown RBP15.34■□□□□ 0.05
TPM1-204ENST00000334895 DKK2Q9UBU2 259 aa15.34■□□□□ 0.05
TPM1-204ENST00000334895 CELA1Q9UNI1 258 aa15.34■□□□□ 0.05
TPM1-204ENST00000334895 FAM222AQ5U5X8 452 aa15.33■□□□□ 0.04
TPM1-204ENST00000334895 LINC00612Q8N6U2 182 aa15.33■□□□□ 0.04
TPM1-204ENST00000334895 SYT8Q8NBV8 401 aa15.33■□□□□ 0.04
TPM1-204ENST00000334895 COLCA2A8K830 154 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 CAMPP49913 170 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 HBBP68871 147 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 PIK3CD-AS1Q5SR53 167 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 NACAE9PAV3 2078 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 A0A0J9YWU9 116 aa15.32■□□□□ 0.04
TPM1-204ENST00000334895 GAGE12BA1L429 117 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 LYRM9A8MSI8 78 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 GAGE7O76087 117 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 GAGE12FP0CL80 117 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 GAGE12GP0CL81 117 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 GAGE12IP0CL82 117 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 FAM210BQ96KR6 192 aa15.31■□□□□ 0.04
TPM1-204ENST00000334895 EVI2AP22794 236 aa15.3■□□□□ 0.04
TPM1-204ENST00000334895 POM121L12Q8N7R1 296 aa15.3■□□□□ 0.04
TPM1-204ENST00000334895 SAMD10Q9BYL1 202 aa15.3■□□□□ 0.04
TPM1-204ENST00000334895 A0A1B0GW15 77 aa15.29■□□□□ 0.04
TPM1-204ENST00000334895 GATD1Q8NB37 220 aa15.29■□□□□ 0.04
TPM1-204ENST00000334895 NDUFAF3Q9BU61 184 aa15.29■□□□□ 0.04
TPM1-204ENST00000334895 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
TPM1-204ENST00000334895 C14orf178Q8N769 122 aaPredicted RBP15.28■□□□□ 0.04
TPM1-204ENST00000334895 AP1S3Q96PC3 154 aa15.28■□□□□ 0.04
TPM1-204ENST00000334895 RS1O15537 224 aa15.28■□□□□ 0.04
TPM1-204ENST00000334895 CRYGDP07320 174 aa15.28■□□□□ 0.04
TPM1-204ENST00000334895 DEFB130BP0DP73 79 aa15.28■□□□□ 0.04
TPM1-204ENST00000334895 DEFB130AP0DP74 79 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms