RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 LINC01545Q5VT33 79 aa10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 Q96MF0 132 aa10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 LMO4P61968 165 aa10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 MRPL53Q96EL3 112 aaKnown RBP10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
DNMT3B-202ENST00000328111 C2orf70A6NJV1 201 aa10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 C10orf105Q8TEF2 133 aa10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 CHCHD5Q9BSY4 110 aa10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 CST9LQ9H4G1 147 aa10.65□□□□□ -0.71
DNMT3B-202ENST00000328111 INSP01308 110 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 GAGE1Q13065 139 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 ODF3BA8MYP8 253 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 TMEM238C9JI98 176 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 PLEKHB2Q96CS7 222 aa10.64□□□□□ -0.71
DNMT3B-202ENST00000328111 C9orf118A6NHY6 69 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 H3BUA1 57 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 DNAL4O96015 105 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 PMVKQ15126 192 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 DEFB136Q30KP8 78 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 UNQ9165/PRO28630Q6UXU0 137 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 TTTY13Q9BZ97 58 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 RNASE1P07998 156 aaKnown RBP10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 TRBV12-3P01733 135 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 PRB1P04280 392 aa10.63□□□□□ -0.71
DNMT3B-202ENST00000328111 TRAV13-1A0A0B4J241 112 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 LOXL1Q08397 574 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 PKD1L2Q7Z442 2459 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 A8MWV9 139 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 K7ERJ3 54 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 LINC01619G3V211 115 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 LY6LH3BQJ8 138 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 ELANEP08246 267 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 HOXD3P31249 432 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 OCIAD2Q56VL3 154 aa10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 ZNF48Q96MX3 618 aaPredicted RBP10.62□□□□□ -0.71
DNMT3B-202ENST00000328111 A0A087WX48 190 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 PRSS29PA6NIE9 313 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 CTRLP40313 264 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 MYMXA0A1B0GTQ4 84 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 C19orf84I3L1E1 186 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 DEFB125Q8N687 156 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
DNMT3B-202ENST00000328111 TRBV6-1A0A0K0K1D8 114 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 J3QLI3 93 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 IGHV3-38A0A0C4DH36 116 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 MYCNOSP40205 109 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 VPREB3Q9UKI3 123 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 PAX2Q02962 417 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 CDSNQ15517 529 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 DLX4Q92988 240 aaPredicted RBP10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 TRBV7-9A0A0J9YWB2 115 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 ZNF625Q96I27 306 aaPredicted RBP10.6□□□□□ -0.71
DNMT3B-202ENST00000328111 I3L3M4 83 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 CCL25O15444 150 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 ATP6V0BQ99437 205 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 ETDBQ3ZM63 59 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 ZNF493Q6ZR52 646 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 C9orf47Q6ZRZ4 202 aa10.59□□□□□ -0.71
DNMT3B-202ENST00000328111 PRRC2AP48634 2157 aaKnown RBP10.58□□□□□ -0.71
DNMT3B-202ENST00000328111 CRIP1P50238 77 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 TTC32Q5I0X7 151 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 TMEM141Q96I45 108 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 M0R2P5 195 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 IGHG2P01859 326 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 SIGMAR1Q99720 223 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 RNF114Q9Y508 228 aa10.58□□□□□ -0.72
DNMT3B-202ENST00000328111 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 K7EP13 123 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 AMTNQ6UX39 209 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 COL4A2P08572 1712 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 RHODO00212 210 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 FSTL3O95633 263 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 DEFB130BP0DP73 79 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 DEFB130AP0DP74 79 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 CFHR3Q02985 330 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 RNASE13Q5GAN3 156 aaKnown RBP10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 A0A1W2PPM0 123 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 SIVA1O15304 175 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
DNMT3B-202ENST00000328111 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
DNMT3B-202ENST00000328111 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms