RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 OR11H6Q8NGC7 330 aa12.29□□□□□ -0.44
CRAT-201ENST00000318080 SPXQ9BT56 116 aa12.29□□□□□ -0.44
CRAT-201ENST00000318080 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 ARL3P36405 182 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 ZNF502Q8TBZ5 544 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 MYOZ3Q8TDC0 251 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 CNFNQ9BYD5 112 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 NBPF19A0A087WUL8 3843 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
CRAT-201ENST00000318080 FBN2P35556 2912 aa12.27□□□□□ -0.44
CRAT-201ENST00000318080 LINC01546A6NGU7 62 aa12.27□□□□□ -0.44
CRAT-201ENST00000318080 H3BVH4 76 aa12.27□□□□□ -0.44
CRAT-201ENST00000318080 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.44
CRAT-201ENST00000318080 PIFOQ8TCI5 191 aa12.27□□□□□ -0.44
CRAT-201ENST00000318080 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.44
CRAT-201ENST00000318080 POLQO75417 2590 aa12.27□□□□□ -0.45
CRAT-201ENST00000318080 A4D1N5 150 aa12.27□□□□□ -0.45
CRAT-201ENST00000318080 Q6ZUT4 128 aa12.26□□□□□ -0.45
CRAT-201ENST00000318080 AGPAT4-IT1Q9H0P7 198 aa12.26□□□□□ -0.45
CRAT-201ENST00000318080 HELZ2Q9BYK8 2649 aaKnown RBP12.26□□□□□ -0.45
CRAT-201ENST00000318080 USP9YO00507 2555 aaPredicted RBP12.26□□□□□ -0.45
CRAT-201ENST00000318080 ATP5LO75964 103 aa12.26□□□□□ -0.45
CRAT-201ENST00000318080 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
CRAT-201ENST00000318080 Q8N8P6 123 aa12.26□□□□□ -0.45
CRAT-201ENST00000318080 IGHV7-81A0A0B4J1V7 117 aa12.25□□□□□ -0.45
CRAT-201ENST00000318080 ODF3BA8MYP8 253 aa12.25□□□□□ -0.45
CRAT-201ENST00000318080 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
CRAT-201ENST00000318080 A0A087WX48 190 aa12.25□□□□□ -0.45
CRAT-201ENST00000318080 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
CRAT-201ENST00000318080 TMEM190Q8WZ59 177 aa12.25□□□□□ -0.45
CRAT-201ENST00000318080 MYMXA0A1B0GTQ4 84 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 LAGE3Q14657 143 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 C15orf32Q32M92 178 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 YAE1D1Q9NRH1 226 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 NRACQ8N912 160 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 BUB3O43684 328 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 SRSF1Q07955 248 aaKnown RBP eCLIP12.24□□□□□ -0.45
CRAT-201ENST00000318080 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
CRAT-201ENST00000318080 IGF1P05019 195 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 VMO1Q7Z5L0 202 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 IGHV7-4-1A0A0J9YVY3 117 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 TMEM78Q5T7P6 136 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 SCGB1D4Q6XE38 83 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 ABCA12Q86UK0 2595 aa12.23□□□□□ -0.45
CRAT-201ENST00000318080 NHLRC4P0CG21 123 aaPredicted RBP12.22□□□□□ -0.45
CRAT-201ENST00000318080 SLC25A16P16260 332 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 PRTN3P24158 256 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 SRSF9Q13242 221 aaKnown RBP eCLIP12.22□□□□□ -0.45
CRAT-201ENST00000318080 Q8N6K4 173 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 TRAV8-2A0A0B4J237 113 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 CCDC179H3BU77 68 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
CRAT-201ENST00000318080 ZNF815PA8K554 130 aa12.21□□□□□ -0.45
CRAT-201ENST00000318080 G3V318 75 aa12.21□□□□□ -0.45
CRAT-201ENST00000318080 RPL39LQ96EH5 51 aaKnown RBP12.21□□□□□ -0.45
CRAT-201ENST00000318080 SCGB2A1O75556 95 aa12.21□□□□□ -0.46
CRAT-201ENST00000318080 ZFP36P26651 326 aaKnown RBP12.21□□□□□ -0.46
CRAT-201ENST00000318080 SRSF2Q01130 221 aaKnown RBP12.21□□□□□ -0.46
CRAT-201ENST00000318080 CLEC19AQ6UXS0 136 aa12.21□□□□□ -0.46
CRAT-201ENST00000318080 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.46
CRAT-201ENST00000318080 DEFB1P60022 68 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 PRR9Q5T870 116 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 Q8N9W7 124 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 SCGB3A1Q96QR1 104 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 TCL1BO95988 128 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
CRAT-201ENST00000318080 TRBV20-1A0A075B6N2 111 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 M0QXV9 152 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 CCDC140Q96MF4 163 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 PPDPFQ9H3Y8 114 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 DOPEY2Q9Y3R5 2298 aa12.19□□□□□ -0.46
CRAT-201ENST00000318080 F8VRH5 84 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 H7C2G1 150 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 ATP6V0E1O15342 81 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 TAL2Q16559 108 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 Q6ZS46 218 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 H7C1H1 209 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
CRAT-201ENST00000318080 M0R381 172 aa12.18□□□□□ -0.46
CRAT-201ENST00000318080 CRIP2P52943 208 aaPredicted RBP12.18□□□□□ -0.46
CRAT-201ENST00000318080 PLNP26678 52 aa12.17□□□□□ -0.46
CRAT-201ENST00000318080 UBTD1Q9HAC8 227 aa12.17□□□□□ -0.46
CRAT-201ENST00000318080 M0R1W7 72 aa12.17□□□□□ -0.46
CRAT-201ENST00000318080 RASL10AQ92737 203 aa12.17□□□□□ -0.46
CRAT-201ENST00000318080 ANKRD29Q8N6D5 301 aa12.16□□□□□ -0.46
CRAT-201ENST00000318080 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
CRAT-201ENST00000318080 ZFAND6Q6FIF0 208 aa12.16□□□□□ -0.46
CRAT-201ENST00000318080 RAX2Q96IS3 184 aa12.16□□□□□ -0.46
CRAT-201ENST00000318080 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
CRAT-201ENST00000318080 VPREB3Q9UKI3 123 aa12.15□□□□□ -0.46
CRAT-201ENST00000318080 TRPT1Q86TN4 253 aaKnown RBP12.15□□□□□ -0.46
CRAT-201ENST00000318080 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
CRAT-201ENST00000318080 C20orf173Q96LM9 149 aa12.15□□□□□ -0.46
CRAT-201ENST00000318080 RBAKDNA6NC62 111 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
CRAT-201ENST00000318080 GAGE7O76087 117 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms