RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 ZFAND6Q6FIF0 208 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 ZNF493Q6ZR52 646 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 HIVEP2P31629 2446 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 B5MCH6 92 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 EVI2AP22794 236 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 PPIFP30405 207 aaKnown RBP10.01□□□□□ -0.81
CPNE1-201ENST00000317677 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-201ENST00000317677 TM4SF20Q53R12 229 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 PRR31Q5SQ13 230 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-201ENST00000317677 PRELID3AQ96N28 172 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 SMR3AQ99954 134 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 UFC1Q9Y3C8 167 aa10.01□□□□□ -0.81
CPNE1-201ENST00000317677 TIMM8BQ9Y5J9 83 aaPredicted RBP10.01□□□□□ -0.81
CPNE1-201ENST00000317677 IGHV3OR16-8A0A075B7F1 116 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 PGPA6NDG6 321 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 LINC01619G3V211 115 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 CLEC3BP05452 202 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 CFAP126Q5VTH2 177 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 TMEM190Q8WZ59 177 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
CPNE1-201ENST00000317677 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 LY6G6DO95868 133 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
CPNE1-201ENST00000317677 SRD5A1P18405 259 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 CLEC19AQ6UXS0 136 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
CPNE1-201ENST00000317677 Q9H3A6 140 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 TMEM262E9PQX1 116 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 BRI3O95415 125 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
CPNE1-201ENST00000317677 TEX29Q8N6K0 151 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 CITED1Q99966 193 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
CPNE1-201ENST00000317677 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE12JA6NER3 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE7O76087 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE12FP0CL80 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE12GP0CL81 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE12IP0CL82 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 GAGE4Q13068 117 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 KRTAP21-3Q3LHN1 58 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 FAM106AQ4KMX7 169 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 TMEM158Q8WZ71 300 aa9.98□□□□□ -0.81
CPNE1-201ENST00000317677 CLPSL1A2RUU4 121 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 J3KRW8 73 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 CFHR3Q02985 330 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 FHL3Q13643 280 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 AMTNQ6UX39 209 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 SIGLEC15Q6ZMC9 328 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 EEF1AKMT3Q96AZ1 226 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 SGK494Q96LW2 274 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 KLK15Q9H2R5 256 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 RHODO00212 210 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 TRGV3P03979 118 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 PRB4P10163 310 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-201ENST00000317677 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-201ENST00000317677 OTORQ9NRC9 128 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 SMAD5-AS1Q9Y6J3 95 aa9.97□□□□□ -0.81
CPNE1-201ENST00000317677 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.81
CPNE1-201ENST00000317677 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.81
CPNE1-201ENST00000317677 TRBV12-3P01733 135 aa9.96□□□□□ -0.81
CPNE1-201ENST00000317677 TCRAP04437 139 aa9.96□□□□□ -0.81
CPNE1-201ENST00000317677 FAM223BA6NKX1 122 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 IGLV1-40P01703 118 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 Q6YL49 198 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 FAM223AQ8IWN6 122 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 FN1P02751 2386 aaKnown RBP9.95□□□□□ -0.82
CPNE1-201ENST00000317677 ARMS2P0C7Q2 107 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 TCTAP57738 103 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 ODF1Q14990 250 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
CPNE1-201ENST00000317677 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
CPNE1-201ENST00000317677 A0A087WX48 190 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 Q6Q795 121 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 SBSPONQ8IVN8 264 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 ORMDL3Q8N138 153 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 SONP18583 2426 aaKnown RBP9.94□□□□□ -0.82
CPNE1-201ENST00000317677 TRAV8-1A0A0A6YYK1 113 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 ARL3P36405 182 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 C10orf99Q6UWK7 81 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 IL17RELQ6ZVW7 336 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 CARD19Q96LW7 228 aa9.94□□□□□ -0.82
CPNE1-201ENST00000317677 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms