RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
LEMD3-201ENST00000308330 TIMM17BO60830 172 aa12.07□□□□□ -0.48
LEMD3-201ENST00000308330 SAA4P35542 130 aa12.07□□□□□ -0.48
LEMD3-201ENST00000308330 Q6ZR03 302 aa12.07□□□□□ -0.48
LEMD3-201ENST00000308330 LGALS9O00182 355 aa12.07□□□□□ -0.48
LEMD3-201ENST00000308330 SPTSSBQ8NFR3 76 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 TRAV12-1A0A0B4J245 112 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 C2orf66Q6UXQ4 117 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 Q6ZQT7 251 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 J3QQQ9 107 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 UBE2L6O14933 153 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
LEMD3-201ENST00000308330 IGLV1-44P01699 117 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 DKK4Q9UBT3 224 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 Q6P435 159 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 SETD2Q9BYW2 2564 aaPredicted RBP12.05□□□□□ -0.48
LEMD3-201ENST00000308330 TNCP24821 2201 aa12.05□□□□□ -0.48
LEMD3-201ENST00000308330 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
LEMD3-201ENST00000308330 PRORYQ9H606 182 aa12.04□□□□□ -0.48
LEMD3-201ENST00000308330 IGKV3D-20A0A0C4DH25 116 aa12.04□□□□□ -0.48
LEMD3-201ENST00000308330 PIFOQ8TCI5 191 aa12.04□□□□□ -0.48
LEMD3-201ENST00000308330 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
LEMD3-201ENST00000308330 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
LEMD3-201ENST00000308330 BUB1B-PAK6H3BSN5 160 aa12.03□□□□□ -0.48
LEMD3-201ENST00000308330 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
LEMD3-201ENST00000308330 CD28P10747 220 aa12.03□□□□□ -0.48
LEMD3-201ENST00000308330 DKK1O94907 266 aa12.03□□□□□ -0.48
LEMD3-201ENST00000308330 C4orf26Q17RF5 130 aa12.03□□□□□ -0.48
LEMD3-201ENST00000308330 LOXL1Q08397 574 aaPredicted RBP12.02□□□□□ -0.48
LEMD3-201ENST00000308330 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.48
LEMD3-201ENST00000308330 RHOHQ15669 191 aa12.02□□□□□ -0.48
LEMD3-201ENST00000308330 RUSC1-AS1Q66K80 236 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 UTRNP46939 3433 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 FAM120AOSQ5T036 256 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 IGKV1-39P01597 117 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 IGKV1D-39P04432 117 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 PMAIP1Q13794 54 aa12.02□□□□□ -0.49
LEMD3-201ENST00000308330 GATA4P43694 442 aa12.01□□□□□ -0.49
LEMD3-201ENST00000308330 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
LEMD3-201ENST00000308330 MRPS12O15235 138 aaKnown RBP12.01□□□□□ -0.49
LEMD3-201ENST00000308330 LEPROTO15243 131 aa12.01□□□□□ -0.49
LEMD3-201ENST00000308330 RPL18AQ02543 176 aaKnown RBP12.01□□□□□ -0.49
LEMD3-201ENST00000308330 F6UB75 175 aa12.01□□□□□ -0.49
LEMD3-201ENST00000308330 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
LEMD3-201ENST00000308330 WISP2O76076 250 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 COL4A3Q01955 1670 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 ELANEP08246 267 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 SERP1Q9Y6X1 66 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 LINC00205P59089 165 aa12□□□□□ -0.49
LEMD3-201ENST00000308330 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
LEMD3-201ENST00000308330 ADORA2A-AS1P86434 159 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 MLST8Q9BVC4 326 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 ARHGAP21Q5T5U3 1957 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 SORL1Q92673 2214 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 PAX8Q06710 450 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 SLC50A1Q9BRV3 221 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 BUB3O43684 328 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 UBE2E1P51965 193 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 Q8NA96 180 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 RNF5Q99942 180 aa11.99□□□□□ -0.49
LEMD3-201ENST00000308330 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 TMEM86BQ8N661 226 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 KLHL30-AS1Q8NEE0 82 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 TOMM7Q9P0U1 55 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 ZNRD1Q9P1U0 126 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 VCYO14598 125 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 VSIG2Q96IQ7 327 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 MED12LQ86YW9 2145 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 TRAV3A0A0B4J244 114 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 ERCC8Q13216 396 aa11.98□□□□□ -0.49
LEMD3-201ENST00000308330 TRBV6-6A0A0A6YYG2 114 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGHV1-69DA0A0B4J2H0 117 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 MUSTN1Q8IVN3 82 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 HTN3P15516 51 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 RNF138Q8WVD3 245 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 TMEM141Q96I45 108 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 DPH3P1Q9H4G8 78 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
LEMD3-201ENST00000308330 OVOL1O14753 267 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
LEMD3-201ENST00000308330 IGF2BP2-AS1Q96M15 143 aa11.97□□□□□ -0.49
LEMD3-201ENST00000308330 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
LEMD3-201ENST00000308330 TP53TG1Q9Y2A0 90 aa11.96□□□□□ -0.49
LEMD3-201ENST00000308330 TRAV23DV6A0A075B6W5 121 aa11.96□□□□□ -0.49
LEMD3-201ENST00000308330 LINC00473A8K010 186 aa11.96□□□□□ -0.49
LEMD3-201ENST00000308330 WIPF1O43516 503 aa11.96□□□□□ -0.49
LEMD3-201ENST00000308330 LOXP28300 417 aaPredicted RBP11.96□□□□□ -0.49
LEMD3-201ENST00000308330 WDR86Q86TI4 376 aa11.96□□□□□ -0.49
LEMD3-201ENST00000308330 C11orf1Q9H5F2 150 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms