RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 PLNP26678 52 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 RNF224P0DH78 156 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 PIFOQ8TCI5 191 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 DOPEY1Q5JWR5 2465 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 APOMO95445 188 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 TRAV9-2A0A087WT02 112 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 PLEKHB2Q96CS7 222 aa6.32□□□□□ -1.4
SNRPD1-201ENST00000300413 ATP5G1P05496 136 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 SS18Q15532 418 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 RAB37Q96AX2 223 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 IGKCP01834 107 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 RPL13AP40429 203 aaKnown RBP6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 IGHV3-73A0A0B4J1V6 119 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 RASL10AQ92737 203 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 U3KQE9 123 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 K7EN84 100 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 PAX4O43316 350 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 VAMP3Q15836 100 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 MRPL51Q4U2R6 128 aaKnown RBP6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 NDUFAF3Q9BU61 184 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 PRO1933Q9H354 126 aa6.31□□□□□ -1.4
SNRPD1-201ENST00000300413 RAI1Q7Z5J4 1906 aaPredicted RBP6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 PRRC2AP48634 2157 aaKnown RBP6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 PSMB2P49721 201 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 GSN-AS1Q9NRJ2 163 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 PLA2G2EQ9NZK7 142 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 VPS13AQ96RL7 3174 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 GFI1BQ5VTD9 330 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 Q8N2B8 174 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 ZNF503Q96F45 646 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 FLNBO75369 2602 aaKnown RBP6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 POLQO75417 2590 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 CTRLP40313 264 aa6.3□□□□□ -1.4
SNRPD1-201ENST00000300413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GAGE12JA6NER3 117 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GAGE1Q13065 139 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GAGE4Q13068 117 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GAGE5Q13069 117 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 MRPL23Q16540 153 aaKnown RBP6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 HIST3H2BBQ8N257 126 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 NOP10Q9NPE3 64 aaKnown RBP6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 ABCA12Q86UK0 2595 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 COL27A1Q8IZC6 1860 aaPredicted RBP6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 IGHV1-24A0A0C4DH33 117 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 H3BMM0 161 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 COL6A3P12111 3177 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 GHRHP01286 108 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 LINC00469Q8N7U9 141 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 C18orf32Q8TCD1 76 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 SIGLEC8Q9NYZ4 499 aa6.29□□□□□ -1.4
SNRPD1-201ENST00000300413 KIR2DL5BA0A0G2JN68 375 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 KIR2DL5BA0A0G2JPC4 375 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 DNLZQ5SXM8 178 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 KIR2DL5AQ8N109 375 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 ZNRF2Q8NHG8 242 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 KIR2DL5BQ8NHK3 375 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 C5orf52A6NGY3 159 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 MRPL16Q9NX20 251 aaKnown RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 TNCP24821 2201 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 GNRH2O43555 120 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 HINT1P49773 126 aaPredicted RBP6.28□□□□□ -1.4
SNRPD1-201ENST00000300413 TRBV10-1A0A0K0K1A3 114 aa6.27□□□□□ -1.41
SNRPD1-201ENST00000300413 COL5A1-AS1Q5SY13 56 aa6.27□□□□□ -1.41
SNRPD1-201ENST00000300413 C2orf66Q6UXQ4 117 aa6.27□□□□□ -1.41
SNRPD1-201ENST00000300413 CFHR3Q02985 330 aa6.27□□□□□ -1.41
SNRPD1-201ENST00000300413 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
SNRPD1-201ENST00000300413 K7EQD1 137 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 SPRY2O43597 315 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 Q8N1Y9 231 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 SPATA25Q9BR10 227 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 MTORP42345 2549 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 LGALS9BQ3B8N2 356 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 SMKR1H3BMG3 65 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 MIFP14174 115 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 PMVKQ15126 192 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 SPANXA1Q9NS26 97 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
SNRPD1-201ENST00000300413 CKS1BP61024 79 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 769.9 ms