RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 RBMY1A1P0DJD3 496 aaKnown RBP18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 RBMY1CP0DJD4 496 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 CKS2P33552 79 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 CDKN1BP46527 198 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 KRTDAPP60985 99 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 RBMY1FQ15415 496 aaKnown RBP18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 ORMDL3Q8N138 153 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 TRAV26-2A0A0B4J265 109 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 IFI27P40305 119 aaPredicted RBP18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 LEPP41159 167 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 DMRTA1Q5VZB9 504 aa18.96■□□□□ 0.63
SDCCAG3-201ENST00000298537 C14orf144Q96I85 54 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 ODF3Q96PU9 254 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 IGHV1-24A0A0C4DH33 117 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 H3BMM0 161 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 FAM159AQ6UWV7 190 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 LINC00173Q6ZV60 143 aa18.95■□□□□ 0.62
SDCCAG3-201ENST00000298537 VWFP04275 2813 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 IGHV4-4A0A075B6R2 117 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 DUSP14O95147 198 aaKnown RBP18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 PRM2P04554 102 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 CD7P09564 240 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 SCRT2Q9NQ03 307 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 SIGLEC8Q9NYZ4 499 aa18.94■□□□□ 0.62
SDCCAG3-201ENST00000298537 HLA-DRB4P13762 266 aa18.93■□□□□ 0.62
SDCCAG3-201ENST00000298537 ODF3L2Q3SX64 289 aa18.93■□□□□ 0.62
SDCCAG3-201ENST00000298537 HLA-DRB4X5D2U9 266 aa18.93■□□□□ 0.62
SDCCAG3-201ENST00000298537 CRXO43186 299 aaPredicted RBP18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 Q8N976 141 aa18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 MDFICQ9P1T7 246 aa18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 PHLDA3Q9Y5J5 127 aa18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 C3orf79P0CE67 100 aa18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 PRO1933Q9H354 126 aa18.92■□□□□ 0.62
SDCCAG3-201ENST00000298537 TRAV2A0A0B4J234 112 aa18.91■□□□□ 0.62
SDCCAG3-201ENST00000298537 SAP30O75446 220 aa18.91■□□□□ 0.62
SDCCAG3-201ENST00000298537 TDRG1Q3Y452 100 aa18.91■□□□□ 0.62
SDCCAG3-201ENST00000298537 SPAG8Q99932 426 aaPredicted RBP18.91■□□□□ 0.62
SDCCAG3-201ENST00000298537 CRLF1O75462 422 aa18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 PRSS3P2Q8NHM4 247 aa18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 CHCHD1Q96BP2 118 aaKnown RBP18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 CACNG7P62955 275 aa18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 Q8N1Y9 231 aa18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 C14orf178Q8N769 122 aaPredicted RBP18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 JPT2Q9H910 190 aa18.9■□□□□ 0.62
SDCCAG3-201ENST00000298537 OR4C46A6NHA9 309 aa18.89■□□□□ 0.61
SDCCAG3-201ENST00000298537 SPATA12Q7Z6I5 190 aa18.88■□□□□ 0.61
SDCCAG3-201ENST00000298537 TSPOP30536 169 aa18.88■□□□□ 0.61
SDCCAG3-201ENST00000298537 ZNF664Q8N3J9 261 aa18.88■□□□□ 0.61
SDCCAG3-201ENST00000298537 HTN1P15515 57 aa18.87■□□□□ 0.61
SDCCAG3-201ENST00000298537 SPATA3Q8NHX4 192 aa18.87■□□□□ 0.61
SDCCAG3-201ENST00000298537 AP5S1Q9NUS5 200 aa18.87■□□□□ 0.61
SDCCAG3-201ENST00000298537 IGHV3-16A0A0C4DH30 117 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 TNFRSF6BO95407 300 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 DNLZQ5SXM8 178 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 IGHV1OR15-1A0A075B7D0 117 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 A8MTW9 85 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 FA2HQ7L5A8 372 aa18.86■□□□□ 0.61
SDCCAG3-201ENST00000298537 A0A096LNJ9 63 aa18.85■□□□□ 0.61
SDCCAG3-201ENST00000298537 WFDC10AQ9H1F0 79 aa18.85■□□□□ 0.61
SDCCAG3-201ENST00000298537 MED14OSP0DP75 135 aa18.84■□□□□ 0.61
SDCCAG3-201ENST00000298537 SMIM15Q7Z3B0 74 aa18.84■□□□□ 0.61
SDCCAG3-201ENST00000298537 ATRQ13535 2644 aa18.84■□□□□ 0.61
SDCCAG3-201ENST00000298537 TRRAPQ9Y4A5 3859 aa18.84■□□□□ 0.61
SDCCAG3-201ENST00000298537 TRAV25A0A0B4J276 109 aa18.84■□□□□ 0.61
SDCCAG3-201ENST00000298537 NRACQ8N912 160 aa18.83■□□□□ 0.61
SDCCAG3-201ENST00000298537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.83■□□□□ 0.6
SDCCAG3-201ENST00000298537 NOTCH3Q9UM47 2321 aa18.82■□□□□ 0.6
SDCCAG3-201ENST00000298537 CYSRT1A8MQ03 144 aa18.82■□□□□ 0.6
SDCCAG3-201ENST00000298537 MCRIP2Q9BUT9 160 aaKnown RBP18.82■□□□□ 0.6
SDCCAG3-201ENST00000298537 TEP1Q99973 2627 aaKnown RBP18.82■□□□□ 0.6
SDCCAG3-201ENST00000298537 NDUFA11Q86Y39 141 aa18.82■□□□□ 0.6
SDCCAG3-201ENST00000298537 LEPROTL1O95214 131 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 IGLV1-51P01701 117 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 PPBPP02775 128 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 MGPP08493 103 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 ATOH7Q8N100 152 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 OR2K2Q8NGT1 345 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 C9orf85Q96MD7 179 aa18.81■□□□□ 0.6
SDCCAG3-201ENST00000298537 NXPH4O95158 308 aa18.8■□□□□ 0.6
SDCCAG3-201ENST00000298537 A0A087WWL8 130 aa18.8■□□□□ 0.6
SDCCAG3-201ENST00000298537 RPL39LQ96EH5 51 aaKnown RBP18.79■□□□□ 0.6
SDCCAG3-201ENST00000298537 MAP1LC3AQ9H492 121 aa18.79■□□□□ 0.6
SDCCAG3-201ENST00000298537 DPH3P1Q9H4G8 78 aa18.79■□□□□ 0.6
SDCCAG3-201ENST00000298537 KIF25-AS1Q9Y6Z4 181 aa18.79■□□□□ 0.6
SDCCAG3-201ENST00000298537 CBY3A6NI87 242 aa18.79■□□□□ 0.6
SDCCAG3-201ENST00000298537 OR11H12B2RN74 326 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 DDTP30046 118 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 LINC00315P59091 139 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 TEX43Q6ZNM6 134 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 BAHCC1Q9P281 2608 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 XCL2Q9UBD3 114 aa18.78■□□□□ 0.6
SDCCAG3-201ENST00000298537 PF4P02776 101 aa18.77■□□□□ 0.6
SDCCAG3-201ENST00000298537 AP1S3Q96PC3 154 aa18.77■□□□□ 0.6
SDCCAG3-201ENST00000298537 H0Y8G0 127 aa18.77■□□□□ 0.59
SDCCAG3-201ENST00000298537 LINC00482Q8N8I6 264 aa18.77■□□□□ 0.59
SDCCAG3-201ENST00000298537 RASL10AQ92737 203 aa18.77■□□□□ 0.59
SDCCAG3-201ENST00000298537 MAJINQ3KP22 176 aa18.76■□□□□ 0.59
SDCCAG3-201ENST00000298537 IGLV2-18A0A075B6J9 118 aa18.75■□□□□ 0.59
SDCCAG3-201ENST00000298537 STHQ8IWL8 128 aa18.75■□□□□ 0.59
SDCCAG3-201ENST00000298537 C2orf88Q9BSF0 95 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms