RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 SCGB2A2Q13296 93 aa15.37■□□□□ 0.05
TMED4-201ENST00000289577 ZFHX2Q9C0A1 2572 aaPredicted RBP15.37■□□□□ 0.05
TMED4-201ENST00000289577 CACNA1BQ00975 2339 aa15.37■□□□□ 0.05
TMED4-201ENST00000289577 RPL32P62910 135 aaKnown RBP15.36■□□□□ 0.05
TMED4-201ENST00000289577 MRPL16Q9NX20 251 aaKnown RBP15.36■□□□□ 0.05
TMED4-201ENST00000289577 NDUFS8O00217 210 aa15.36■□□□□ 0.05
TMED4-201ENST00000289577 NDUFA4O00483 81 aa15.36■□□□□ 0.05
TMED4-201ENST00000289577 DEFB1P60022 68 aa15.36■□□□□ 0.05
TMED4-201ENST00000289577 CFAP126Q5VTH2 177 aa15.36■□□□□ 0.05
TMED4-201ENST00000289577 IGHV1-69DA0A0B4J2H0 117 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 TRBV7-9A0A0J9YWB2 115 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 GNRH2O43555 120 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 RNASE4P34096 147 aaKnown RBP15.35■□□□□ 0.05
TMED4-201ENST00000289577 LMO4P61968 165 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 LCNL1Q6ZST4 164 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 ATP6V0E2Q8NHE4 81 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 DLX4Q92988 240 aaPredicted RBP15.35■□□□□ 0.05
TMED4-201ENST00000289577 MOB4Q9Y3A3 225 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 KIF25-AS1Q9Y6Z4 181 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 MED13LQ71F56 2210 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 DUSP14O95147 198 aaKnown RBP15.35■□□□□ 0.05
TMED4-201ENST00000289577 TSHBP01222 138 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 SMCPP49901 116 aaPredicted RBP15.35■□□□□ 0.05
TMED4-201ENST00000289577 LINC00315P59091 139 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 SCGB1D4Q6XE38 83 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 TMEM219Q86XT9 240 aa15.35■□□□□ 0.05
TMED4-201ENST00000289577 IGLV4-69A0A075B6H9 119 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 IGHV4OR15-8A0A075B7B6 117 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 A0A087WW49 117 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 LINC01549A6NIU2 74 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 TRBV12-3P01733 135 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 CD7P09564 240 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 PTPRQQ9UMZ3 2332 aa15.34■□□□□ 0.05
TMED4-201ENST00000289577 FOXC1Q12948 553 aa15.33■□□□□ 0.05
TMED4-201ENST00000289577 LINC00527Q9UJ94 153 aa15.33■□□□□ 0.05
TMED4-201ENST00000289577 RELNP78509 3460 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 IGIPA6NJ69 53 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 C11orf86A6NJI1 115 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 APOMO95445 188 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 TSPAN13O95857 204 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 NBL1P41271 181 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 UBE2D3P61077 147 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 UBE2D2P62837 147 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 C1QTNF4Q9BXJ3 329 aa15.33■□□□□ 0.04
TMED4-201ENST00000289577 FOXI1Q12951 378 aa15.32■□□□□ 0.04
TMED4-201ENST00000289577 SRSF9Q13242 221 aaKnown RBP eCLIP15.32■□□□□ 0.04
TMED4-201ENST00000289577 PAPPA-AS1Q5QFB9 102 aa15.32■□□□□ 0.04
TMED4-201ENST00000289577 KLHL30-AS1Q8NEE0 82 aa15.32■□□□□ 0.04
TMED4-201ENST00000289577 A0A0J9YY99 117 aa15.31■□□□□ 0.04
TMED4-201ENST00000289577 SVEP1Q4LDE5 3571 aa15.31■□□□□ 0.04
TMED4-201ENST00000289577 F6UB75 175 aa15.31■□□□□ 0.04
TMED4-201ENST00000289577 POLR2KP53803 58 aaKnown RBP15.31■□□□□ 0.04
TMED4-201ENST00000289577 PMVKQ15126 192 aa15.3■□□□□ 0.04
TMED4-201ENST00000289577 ZFP2Q6ZN57 461 aa15.3■□□□□ 0.04
TMED4-201ENST00000289577 TP53TG1Q9Y2A0 90 aa15.3■□□□□ 0.04
TMED4-201ENST00000289577 MUC4Q99102 2169 aa15.3■□□□□ 0.04
TMED4-201ENST00000289577 HERVK_113P61574 105 aa15.29■□□□□ 0.04
TMED4-201ENST00000289577 BPESC1Q9GZL8 116 aa15.29■□□□□ 0.04
TMED4-201ENST00000289577 BRI3O95415 125 aa15.29■□□□□ 0.04
TMED4-201ENST00000289577 TMEM141Q96I45 108 aa15.29■□□□□ 0.04
TMED4-201ENST00000289577 SPTBN2O15020 2390 aa15.29■□□□□ 0.04
TMED4-201ENST00000289577 NDUFA11Q86Y39 141 aa15.28■□□□□ 0.04
TMED4-201ENST00000289577 A0A1B0GV72 72 aa15.28■□□□□ 0.04
TMED4-201ENST00000289577 KLLNB2CW77 178 aa15.27■□□□□ 0.04
TMED4-201ENST00000289577 PSMB2P49721 201 aa15.27■□□□□ 0.04
TMED4-201ENST00000289577 KLRB1Q12918 225 aa15.27■□□□□ 0.04
TMED4-201ENST00000289577 NFE4Q86UQ8 179 aa15.27■□□□□ 0.04
TMED4-201ENST00000289577 TIMM17AQ99595 171 aa15.27■□□□□ 0.04
TMED4-201ENST00000289577 LOC107984156A0A0G2JMH3 177 aa15.27■□□□□ 0.03
TMED4-201ENST00000289577 VCYO14598 125 aa15.27■□□□□ 0.03
TMED4-201ENST00000289577 SUMO4Q6EEV6 95 aa15.27■□□□□ 0.03
TMED4-201ENST00000289577 ARL17AQ8IVW1 177 aa15.27■□□□□ 0.03
TMED4-201ENST00000289577 USMG5Q96IX5 58 aa15.27■□□□□ 0.03
TMED4-201ENST00000289577 RPL11P62913 178 aaKnown RBP15.26■□□□□ 0.03
TMED4-201ENST00000289577 TCTEX1D4Q5JR98 221 aa15.26■□□□□ 0.03
TMED4-201ENST00000289577 LYRM7Q5U5X0 104 aa15.26■□□□□ 0.03
TMED4-201ENST00000289577 CLEC2AQ6UVW9 174 aa15.26■□□□□ 0.03
TMED4-201ENST00000289577 CDIP1Q9H305 208 aa15.26■□□□□ 0.03
TMED4-201ENST00000289577 H3BUA1 57 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 IGHV3-30P01768 117 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 IGHV3-30-5P0DP03 117 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 SLC25A29Q8N8R3 303 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 UBTD1Q9HAC8 227 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 EMP1P54849 157 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 TSPEAR-AS2P59090 65 aa15.25■□□□□ 0.03
TMED4-201ENST00000289577 RPL39P62891 51 aaKnown RBP15.24■□□□□ 0.03
TMED4-201ENST00000289577 ZNF876PQ49A33 203 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 SYT8Q8NBV8 401 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 SFTA2Q6UW10 78 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 Q6ZS46 218 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 AMELXQ99217 191 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 KIR2DL4Q99706 377 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 RHPN1-AS1Q9BWJ2 59 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 JPT2Q9H910 190 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 SPTA1P02549 2419 aa15.24■□□□□ 0.03
TMED4-201ENST00000289577 PTPRZ1P23471 2315 aaPredicted RBP15.23■□□□□ 0.03
TMED4-201ENST00000289577 IGHV3OR16-10A0A075B7F0 116 aa15.23■□□□□ 0.03
TMED4-201ENST00000289577 CFC1BP0CG36 223 aa15.23■□□□□ 0.03
TMED4-201ENST00000289577 CFC1P0CG37 223 aa15.23■□□□□ 0.03
TMED4-201ENST00000289577 SBSPONQ8IVN8 264 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms