RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 AMTNQ6UX39 209 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 ZFP36L1Q07352 338 aaKnown RBP6.96□□□□□ -1.3
NIPBL-201ENST00000282516 RUSC1-AS1Q66K80 236 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 V9GYV3 84 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 ATP5G1P05496 136 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
NIPBL-201ENST00000282516 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
NIPBL-201ENST00000282516 PNRC2Q9NPJ4 139 aaKnown RBP6.96□□□□□ -1.3
NIPBL-201ENST00000282516 KIR2DL5BA0A0G2JN68 375 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 KIR2DL5BA0A0G2JPC4 375 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 TEX36Q5VZQ5 186 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 KIR2DL5AQ8N109 375 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 GNLYP22749 145 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 Q9HAA7 133 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 IGLL1P15814 213 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 IGKV3D-7A0A0C4DH55 119 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 Q6ZQT7 251 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 CYYR1Q96J86 154 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 PRDM6Q9NQX0 595 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 TEN1Q86WV5 123 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 SND1-IT1Q9HBX3 110 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 H3BUA1 57 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
NIPBL-201ENST00000282516 CEP192Q8TEP8 1941 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 NDUFA1O15239 70 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 CASC2Q6XLA1 102 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 C11orf52Q96A22 123 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 QRFPP83859 136 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 WDR90Q96KV7 1748 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
NIPBL-201ENST00000282516 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
NIPBL-201ENST00000282516 WIPF2Q8TF74 440 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-201ENST00000282516 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
NIPBL-201ENST00000282516 A0A096LPF7 62 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 DKK2Q9UBU2 259 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 KIAA1549LQ6ZVL6 1849 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 K7EQD1 137 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 FOXE3Q13461 319 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 KIAA1671Q9BY89 1806 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 CRYGBP07316 175 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 CXCL5P42830 114 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 HIST2H2BCQ6DN03 193 aa6.94□□□□□ -1.3
NIPBL-201ENST00000282516 COL8A2P25067 703 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 TM2D2Q9BX73 214 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 ZFHX2Q9C0A1 2572 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-201ENST00000282516 H0Y9J4 135 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 IGHV2-70P01814 119 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 GYPEP15421 78 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 ELANEP08246 267 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 ADCYAP1P18509 176 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
NIPBL-201ENST00000282516 LYPD2Q6UXB3 125 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 ZNF106Q9H2Y7 1883 aaKnown RBP6.93□□□□□ -1.3
NIPBL-201ENST00000282516 CCL25O15444 150 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-201ENST00000282516 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-201ENST00000282516 CCL18P55774 89 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
NIPBL-201ENST00000282516 LENEPQ9Y5L5 61 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 VOPP1Q96AW1 172 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 TMEM61Q8N0U2 210 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 A0A0J9YY99 117 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 G3V318 75 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 KIR2DL5BQ8NHK3 375 aa6.92□□□□□ -1.3
NIPBL-201ENST00000282516 U3KQE9 123 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 USP17L23D6RBM5 183 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 FXYD5Q96DB9 178 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 FLVCR1-AS1Q8TAF5 88 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 SEM1Q6ZVN7 128 aa6.91□□□□□ -1.3
NIPBL-201ENST00000282516 IGLC1P0CG04 106 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 Q71RC1 249 aaPredicted RBP6.9□□□□□ -1.3
NIPBL-201ENST00000282516 Q96MF0 132 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 C14orf177Q52M58 125 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 ATP5EP2Q5VTU8 51 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 LINC00311Q8N616 119 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
NIPBL-201ENST00000282516 K7EM74 188 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 DUX4L9Q6RFH8 374 aaPredicted RBP6.9□□□□□ -1.31
NIPBL-201ENST00000282516 Q6ZRM9 215 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 UPK3BQ9BT76 320 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 E7EQL1 145 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 MST1P26927 711 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 DIRC1Q969H9 104 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 ACANP16112 2415 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 TMEM256-PLSCR3K7ERE1 68 aa6.9□□□□□ -1.31
NIPBL-201ENST00000282516 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
NIPBL-201ENST00000282516 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 LGALS9O00182 355 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 LY6HO94772 140 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
NIPBL-201ENST00000282516 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms