RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 C9orf85Q96MD7 179 aa16.72■□□□□ 0.27
SMARCB1-201ENST00000263121 TMEM191AQ9H0A3 160 aa16.72■□□□□ 0.27
SMARCB1-201ENST00000263121 TRGV11A0A075B6L2 103 aa16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 LOC102724200A0A096LPH7 203 aaPredicted RBP16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 LOC105371267A0A1B0GV96 52 aa16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 RPL35AP18077 110 aaKnown RBP16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 SNRPEP62304 92 aaKnown RBP16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 MORN3Q6PF18 240 aaPredicted RBP16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 MDFICQ9P1T7 246 aa16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 PHLDA3Q9Y5J5 127 aa16.71■□□□□ 0.27
SMARCB1-201ENST00000263121 NXPH4O95158 308 aa16.7■□□□□ 0.26
SMARCB1-201ENST00000263121 DMRTA1Q5VZB9 504 aa16.7■□□□□ 0.26
SMARCB1-201ENST00000263121 CBY3A6NI87 242 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 SPRY2O43597 315 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 FAM104BQ5XKR9 115 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 C1orf158Q8N1D5 194 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 SRIP30626 198 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 COA6Q5JTJ3 125 aaKnown RBP16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 TMEM256Q8N2U0 113 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 LINC01587Q99440 93 aa16.69■□□□□ 0.26
SMARCB1-201ENST00000263121 AMN1Q8IY45 258 aa16.68■□□□□ 0.26
SMARCB1-201ENST00000263121 ALKBH7Q9BT30 221 aaPredicted RBP16.68■□□□□ 0.26
SMARCB1-201ENST00000263121 STAB1Q9NY15 2570 aa16.67■□□□□ 0.26
SMARCB1-201ENST00000263121 M0R381 172 aa16.67■□□□□ 0.26
SMARCB1-201ENST00000263121 C1QTNF4Q9BXJ3 329 aa16.66■□□□□ 0.26
SMARCB1-201ENST00000263121 NOTCH3Q9UM47 2321 aa16.66■□□□□ 0.26
SMARCB1-201ENST00000263121 Q0VG73 95 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 OXLD1Q5BKU9 147 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 RNF185Q96GF1 192 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 UBE2CO00762 179 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 HTN1P15515 57 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 HOXA5P20719 270 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 EVI2AP22794 236 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 CSNK1G2-AS1Q8NCQ2 148 aa16.65■□□□□ 0.26
SMARCB1-201ENST00000263121 MUC4Q99102 2169 aa16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 PRM2P04554 102 aa16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 MRPL51Q4U2R6 128 aaKnown RBP16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 OR10J3Q5JRS4 329 aa16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 SMIM15Q7Z3B0 74 aa16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 TMEM208Q9BTX3 173 aa16.64■□□□□ 0.25
SMARCB1-201ENST00000263121 RAB4AP20338 218 aa16.63■□□□□ 0.25
SMARCB1-201ENST00000263121 U3KQK5 164 aa16.63■□□□□ 0.25
SMARCB1-201ENST00000263121 C18orf32Q8TCD1 76 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 CSTL1Q9H114 145 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 CMYA5Q8N3K9 4069 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 ZNF415Q09FC8 603 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 EGFEM1PQ0D2K5 195 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 C11orf72Q8NBR9 251 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 GOLT1BQ9Y3E0 138 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 COL6A5A8TX70 2615 aa16.62■□□□□ 0.25
SMARCB1-201ENST00000263121 AP1S3Q96PC3 154 aa16.61■□□□□ 0.25
SMARCB1-201ENST00000263121 IGHV3OR16-12A0A075B7B8 117 aa16.6■□□□□ 0.25
SMARCB1-201ENST00000263121 SYT8Q8NBV8 401 aa16.6■□□□□ 0.25
SMARCB1-201ENST00000263121 MDFIQ99750 246 aa16.6■□□□□ 0.25
SMARCB1-201ENST00000263121 D6R8Y8 96 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 LINC00310P59036 64 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 HIST3H2BBQ8N257 126 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 ANK2Q01484 3957 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 AZU1P20160 251 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 KRTAP10-11P60412 298 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 IQCJQ1A5X6 159 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 ZNF705AQ6ZN79 300 aaPredicted RBP16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 BAGE3Q86Y29 109 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 ORMDL3Q8N138 153 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 DPH3P1Q9H4G8 78 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 GSN-AS1Q9NRJ2 163 aa16.59■□□□□ 0.25
SMARCB1-201ENST00000263121 C14orf178Q8N769 122 aaPredicted RBP16.58■□□□□ 0.24
SMARCB1-201ENST00000263121 KIF25-AS1Q9Y6Z4 181 aa16.58■□□□□ 0.24
SMARCB1-201ENST00000263121 RNASE8Q8TDE3 154 aaKnown RBP16.57■□□□□ 0.24
SMARCB1-201ENST00000263121 PTH2Q96A98 100 aa16.57■□□□□ 0.24
SMARCB1-201ENST00000263121 RCHY1Q96PM5 261 aa16.57■□□□□ 0.24
SMARCB1-201ENST00000263121 IFITM10A6NMD0 228 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 PPBPP02775 128 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 CKS2P33552 79 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 ZNF876PQ49A33 203 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 IL17DQ8TAD2 202 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 PRELID3AQ96N28 172 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 SPXQ9BT56 116 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 JPT2Q9H910 190 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 KIR2DL5BA0A0G2JN68 375 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 KIR2DL5BA0A0G2JPC4 375 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 SMKR1H3BMG3 65 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 M0R2P5 195 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 NUPR1O60356 82 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 SERF1AO75920 110 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 KIR2DL5AQ8N109 375 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 KIR2DL5BQ8NHK3 375 aa16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 TMEM263Q8WUH6 116 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-201ENST00000263121 NCR2O95944 276 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 ESDP10768 282 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 LINC00315P59091 139 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 PDZD11Q5EBL8 140 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 PIK3CD-AS1Q5SR53 167 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 POM121L12Q8N7R1 296 aa16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 ZMAT5Q9UDW3 170 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-201ENST00000263121 GAS8-AS1O95177 125 aa16.53■□□□□ 0.24
SMARCB1-201ENST00000263121 MRAP2Q96G30 205 aa16.53■□□□□ 0.24
SMARCB1-201ENST00000263121 IGHV4-30-4P0DP06 118 aa16.53■□□□□ 0.24
SMARCB1-201ENST00000263121 APOC4P55056 127 aa16.53■□□□□ 0.24
SMARCB1-201ENST00000263121 LAMTOR2Q9Y2Q5 125 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms