RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MAPK1IP1LQ8NDC0 245 aa19.25■□□□□ 0.67
RAB40C-201ENST00000248139 CHAC1Q9BUX1 264 aa19.25■□□□□ 0.67
RAB40C-201ENST00000248139 USMG5Q96IX5 58 aa19.24■□□□□ 0.67
RAB40C-201ENST00000248139 MXRA5Q9NR99 2828 aa19.24■□□□□ 0.67
RAB40C-201ENST00000248139 RNASE3P12724 160 aaKnown RBP19.24■□□□□ 0.67
RAB40C-201ENST00000248139 FBN2P35556 2912 aa19.24■□□□□ 0.67
RAB40C-201ENST00000248139 IGKV3-20P01619 116 aa19.23■□□□□ 0.67
RAB40C-201ENST00000248139 SUMO2P61956 95 aaKnown RBP19.23■□□□□ 0.67
RAB40C-201ENST00000248139 OCIAD2Q56VL3 154 aa19.23■□□□□ 0.67
RAB40C-201ENST00000248139 LENEPQ9Y5L5 61 aa19.23■□□□□ 0.67
RAB40C-201ENST00000248139 PRSS47A8MTI9 375 aa19.22■□□□□ 0.67
RAB40C-201ENST00000248139 MRAP2Q96G30 205 aa19.22■□□□□ 0.67
RAB40C-201ENST00000248139 ATP6V0BQ99437 205 aa19.22■□□□□ 0.67
RAB40C-201ENST00000248139 A0A087WX48 190 aa19.21■□□□□ 0.67
RAB40C-201ENST00000248139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.21■□□□□ 0.67
RAB40C-201ENST00000248139 DPH3P1Q9H4G8 78 aa19.21■□□□□ 0.67
RAB40C-201ENST00000248139 DAZ1Q9NQZ3 744 aaKnown RBP19.21■□□□□ 0.67
RAB40C-201ENST00000248139 IGHV4-59P01825 116 aa19.2■□□□□ 0.66
RAB40C-201ENST00000248139 SCGB3A1Q96QR1 104 aa19.2■□□□□ 0.66
RAB40C-201ENST00000248139 ANKRD17O75179 2603 aaKnown RBP19.2■□□□□ 0.66
RAB40C-201ENST00000248139 RNF223E7ERA6 249 aa19.2■□□□□ 0.66
RAB40C-201ENST00000248139 SAP30O75446 220 aa19.2■□□□□ 0.66
RAB40C-201ENST00000248139 FAM19A4Q96LR4 140 aa19.2■□□□□ 0.66
RAB40C-201ENST00000248139 IGLV1-40P01703 118 aa19.19■□□□□ 0.66
RAB40C-201ENST00000248139 UFSP1Q6NVU6 142 aa19.19■□□□□ 0.66
RAB40C-201ENST00000248139 SMPXQ9UHP9 88 aa19.19■□□□□ 0.66
RAB40C-201ENST00000248139 TRAV12-3A0A0B4J271 114 aa19.18■□□□□ 0.66
RAB40C-201ENST00000248139 CDKN1BP46527 198 aa19.18■□□□□ 0.66
RAB40C-201ENST00000248139 NHP2Q9NX24 153 aaKnown RBP19.18■□□□□ 0.66
RAB40C-201ENST00000248139 A0A087WWL8 130 aa19.17■□□□□ 0.66
RAB40C-201ENST00000248139 ZNF688P0C7X2 276 aa19.17■□□□□ 0.66
RAB40C-201ENST00000248139 TRAV12-2A0A075B6T6 113 aa19.16■□□□□ 0.66
RAB40C-201ENST00000248139 LRRK2Q5S007 2527 aa19.16■□□□□ 0.66
RAB40C-201ENST00000248139 A0A1W2PPM0 123 aa19.16■□□□□ 0.66
RAB40C-201ENST00000248139 SMIM13P0DJ93 91 aa19.16■□□□□ 0.66
RAB40C-201ENST00000248139 CSTL1Q9H114 145 aa19.16■□□□□ 0.66
RAB40C-201ENST00000248139 DEFB112Q30KQ8 113 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 C2orf66Q6UXQ4 117 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 DUX5Q96PT3 197 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 VPS25Q9BRG1 176 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 K7EP34 96 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 SPCS1Q9Y6A9 102 aa19.15■□□□□ 0.66
RAB40C-201ENST00000248139 H3BUA1 57 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 EMP1P54849 157 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 GTF2H5Q6ZYL4 71 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 CHTOPQ9Y3Y2 248 aaKnown RBP19.14■□□□□ 0.65
RAB40C-201ENST00000248139 CFHR3Q02985 330 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 DCANP1Q8TF63 244 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 TOMM6Q96B49 74 aa19.14■□□□□ 0.65
RAB40C-201ENST00000248139 NDUFS8O00217 210 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 F8VRH5 84 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 CD7P09564 240 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 ORMDL2Q53FV1 153 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 SAMD5Q5TGI4 173 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 HIGD1BQ9P298 99 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 ABCA12Q86UK0 2595 aa19.13■□□□□ 0.65
RAB40C-201ENST00000248139 H7C1H1 209 aa19.12■□□□□ 0.65
RAB40C-201ENST00000248139 PSMG4Q5JS54 123 aa19.12■□□□□ 0.65
RAB40C-201ENST00000248139 FAM159AQ6UWV7 190 aa19.12■□□□□ 0.65
RAB40C-201ENST00000248139 CEND1Q8N111 149 aa19.11■□□□□ 0.65
RAB40C-201ENST00000248139 BAALCQ8WXS3 180 aa19.11■□□□□ 0.65
RAB40C-201ENST00000248139 PTPN13Q12923 2485 aa19.11■□□□□ 0.65
RAB40C-201ENST00000248139 B4DSR2 109 aa19.11■□□□□ 0.65
RAB40C-201ENST00000248139 DUSP14O95147 198 aaKnown RBP19.11■□□□□ 0.65
RAB40C-201ENST00000248139 NEXN-AS1Q8NBZ9 246 aa19.11■□□□□ 0.65
RAB40C-201ENST00000248139 LINC00315P59091 139 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 FAM74A4Q5TZK3 123 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 C20orf78Q9BR46 151 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 F5H697 171 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 PLNP26678 52 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 APRG1Q8IVJ8 170 aa19.1■□□□□ 0.65
RAB40C-201ENST00000248139 PRSS29PA6NIE9 313 aa19.09■□□□□ 0.65
RAB40C-201ENST00000248139 KLLNB2CW77 178 aa19.09■□□□□ 0.65
RAB40C-201ENST00000248139 KIF25-AS1Q9Y6Z4 181 aa19.09■□□□□ 0.65
RAB40C-201ENST00000248139 ZNF462Q96JM2 2506 aa19.09■□□□□ 0.65
RAB40C-201ENST00000248139 PSMB8P28062 276 aa19.08■□□□□ 0.65
RAB40C-201ENST00000248139 TEX15Q9BXT5 2789 aa19.08■□□□□ 0.65
RAB40C-201ENST00000248139 RPL39P62891 51 aaKnown RBP19.08■□□□□ 0.64
RAB40C-201ENST00000248139 PHLDA1Q8WV24 401 aaPredicted RBP19.08■□□□□ 0.64
RAB40C-201ENST00000248139 MDFICQ9P1T7 246 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 BRI3O95415 125 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 FABP2P12104 132 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 HLA-DRB4P13762 266 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 HIST1H4GQ99525 98 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 HLA-DRB4X5D2U9 266 aa19.08■□□□□ 0.64
RAB40C-201ENST00000248139 TLN2Q9Y4G6 2542 aa19.07■□□□□ 0.64
RAB40C-201ENST00000248139 SUMO4Q6EEV6 95 aa19.07■□□□□ 0.64
RAB40C-201ENST00000248139 MYO9AB2RTY4 2548 aa19.06■□□□□ 0.64
RAB40C-201ENST00000248139 TRAV12-1A0A0B4J245 112 aa19.06■□□□□ 0.64
RAB40C-201ENST00000248139 SYNJ2BPP57105 145 aa19.06■□□□□ 0.64
RAB40C-201ENST00000248139 TM2D2Q9BX73 214 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 OR11H12B2RN74 326 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 ID1P41134 155 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 OR11H1Q8NG94 326 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 OR11H2Q8NH07 326 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 CYSLTR1Q9Y271 337 aa19.05■□□□□ 0.64
RAB40C-201ENST00000248139 SPINK13Q1W4C9 94 aa19.04■□□□□ 0.64
RAB40C-201ENST00000248139 TP53TG1Q9Y2A0 90 aa19.04■□□□□ 0.64
RAB40C-201ENST00000248139 TGFAP01135 160 aa19.04■□□□□ 0.64
RAB40C-201ENST00000248139 HIST2H2BDQ6DRA6 164 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 293.7 ms