RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 FBN1P35555 2871 aaKnown RBP11.17□□□□□ -0.62
HDHD3-201ENST00000238379 SPRY2O43597 315 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 SERF1AO75920 110 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 IQCJQ1A5X6 159 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 Q8N1Y9 231 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 WFDC9Q8NEX5 89 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 HIST1H2BLQ99880 126 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 ZNF747Q9BV97 191 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
HDHD3-201ENST00000238379 ESDP10768 282 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 EVI2AP22794 236 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 S100A2P29034 98 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 MRPL51Q4U2R6 128 aaKnown RBP11.15□□□□□ -0.62
HDHD3-201ENST00000238379 RNF185Q96GF1 192 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 RCHY1Q96PM5 261 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 U3KQK5 164 aa11.15□□□□□ -0.62
HDHD3-201ENST00000238379 M0R381 172 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 NXPH4O95158 308 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 AMBPP02760 352 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 FABP4P15090 132 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 RAB4AP20338 218 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
HDHD3-201ENST00000238379 C20orf144Q9BQM9 153 aa11.13□□□□□ -0.63
HDHD3-201ENST00000238379 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
HDHD3-201ENST00000238379 MUC4Q99102 2169 aa11.13□□□□□ -0.63
HDHD3-201ENST00000238379 D6R8Y8 96 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 INSP01308 110 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
HDHD3-201ENST00000238379 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 MCRIP2Q9BUT9 160 aaKnown RBP11.12□□□□□ -0.63
HDHD3-201ENST00000238379 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
HDHD3-201ENST00000238379 STAB1Q9NY15 2570 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 CBY3A6NI87 242 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 CKS2P33552 79 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 TMEM18Q96B42 140 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 URB1-AS1Q96HZ7 61 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 PRELID3AQ96N28 172 aa11.11□□□□□ -0.63
HDHD3-201ENST00000238379 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
HDHD3-201ENST00000238379 GIG44P09565 113 aaPredicted RBP11.1□□□□□ -0.63
HDHD3-201ENST00000238379 HTN1P15515 57 aa11.1□□□□□ -0.63
HDHD3-201ENST00000238379 NIT1Q86X76 327 aa11.1□□□□□ -0.63
HDHD3-201ENST00000238379 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
HDHD3-201ENST00000238379 C3orf56Q8N813 242 aa11.1□□□□□ -0.63
HDHD3-201ENST00000238379 PACRGQ96M98 296 aaPredicted RBP11.1□□□□□ -0.63
HDHD3-201ENST00000238379 PPBPP02775 128 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 PRM2P04554 102 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 IGLL1P15814 213 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 DEFB125Q8N687 156 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 LINC01587Q99440 93 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 WIPF1O43516 503 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 NCR2O95944 276 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
HDHD3-201ENST00000238379 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
HDHD3-201ENST00000238379 NPYP01303 97 aa11.08□□□□□ -0.64
HDHD3-201ENST00000238379 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
HDHD3-201ENST00000238379 AP1S3Q96PC3 154 aa11.08□□□□□ -0.64
HDHD3-201ENST00000238379 DPH3P1Q9H4G8 78 aa11.08□□□□□ -0.64
HDHD3-201ENST00000238379 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
HDHD3-201ENST00000238379 C12orf54Q6X4T0 127 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 LINC00315P59091 139 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 RNASEKQ6P5S7 137 aaKnown RBP11.07□□□□□ -0.64
HDHD3-201ENST00000238379 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 TMEM158Q8WZ71 300 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 JPT2Q9H910 190 aa11.07□□□□□ -0.64
HDHD3-201ENST00000238379 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 LINC00614P0C842 121 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 GATA1P15976 413 aaPredicted RBP11.06□□□□□ -0.64
HDHD3-201ENST00000238379 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
HDHD3-201ENST00000238379 LINC00518Q8N0U6 118 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 C11orf72Q8NBR9 251 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
HDHD3-201ENST00000238379 TMEM208Q9BTX3 173 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
HDHD3-201ENST00000238379 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 HSBP1O75506 76 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 PMCHP20382 165 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 AMTP48728 403 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 ZNF876PQ49A33 203 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 POM121L12Q8N7R1 296 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 CSNK1G2-AS1Q8NCQ2 148 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 TNFRSF6BO95407 300 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 AZU1P20160 251 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 ZNF415Q09FC8 603 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
HDHD3-201ENST00000238379 IGHV3OR16-12A0A075B7B8 117 aa11.04□□□□□ -0.64
HDHD3-201ENST00000238379 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
HDHD3-201ENST00000238379 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 1197.6 ms