RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 C1orf122Q6ZSJ8 110 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 RASL10AQ92737 203 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 HLA-DRB4X5D2U9 266 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 PRSS29PA6NIE9 313 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 INSL3P51460 131 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 GAGE12HA6NDE8 117 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 NPFFO15130 113 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 PF4V1P10720 104 aa13.09□□□□□ -0.31
H2AFV-201ENST00000222690 F8W1H4 67 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 IGKV3-20P01619 116 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 RRN3P1Q2M238 152 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 A0A087WWL8 130 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 LINC01546A6NGU7 62 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 LINC01549A6NIU2 74 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 C9orf139Q6ZV77 190 aa13.08□□□□□ -0.32
H2AFV-201ENST00000222690 SPANXB1Q9NS25 103 aaPredicted RBP13.08□□□□□ -0.32
H2AFV-201ENST00000222690 PSMB2P49721 201 aa13.07□□□□□ -0.32
H2AFV-201ENST00000222690 SPOCK3Q9BQ16 436 aa13.07□□□□□ -0.32
H2AFV-201ENST00000222690 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
H2AFV-201ENST00000222690 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
H2AFV-201ENST00000222690 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
H2AFV-201ENST00000222690 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
H2AFV-201ENST00000222690 JPT2Q9H910 190 aa13.06□□□□□ -0.32
H2AFV-201ENST00000222690 LGALS1P09382 135 aaKnown RBP13.06□□□□□ -0.32
H2AFV-201ENST00000222690 FBXL19-AS1Q494R0 122 aa13.06□□□□□ -0.32
H2AFV-201ENST00000222690 PLEKHB2Q96CS7 222 aa13.06□□□□□ -0.32
H2AFV-201ENST00000222690 PSMG3-AS1Q96PY0 264 aa13.05□□□□□ -0.32
H2AFV-201ENST00000222690 C5orf56Q8N8D9 126 aa13.05□□□□□ -0.32
H2AFV-201ENST00000222690 TAL2Q16559 108 aa13.05□□□□□ -0.32
H2AFV-201ENST00000222690 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
H2AFV-201ENST00000222690 TOMM6Q96B49 74 aa13.05□□□□□ -0.32
H2AFV-201ENST00000222690 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
H2AFV-201ENST00000222690 TP53TG1Q9Y2A0 90 aa13.04□□□□□ -0.32
H2AFV-201ENST00000222690 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
H2AFV-201ENST00000222690 RPL39P62891 51 aaKnown RBP13.04□□□□□ -0.32
H2AFV-201ENST00000222690 NEXN-AS1Q8NBZ9 246 aa13.04□□□□□ -0.32
H2AFV-201ENST00000222690 TRBV7-3A0A075B6L6 115 aa13.03□□□□□ -0.32
H2AFV-201ENST00000222690 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
H2AFV-201ENST00000222690 H7C2G1 150 aa13.03□□□□□ -0.32
H2AFV-201ENST00000222690 NDUFS8O00217 210 aa13.03□□□□□ -0.32
H2AFV-201ENST00000222690 ZFHX3Q15911 3703 aa13.03□□□□□ -0.32
H2AFV-201ENST00000222690 TMEM238LA0A1B0GVL6 79 aa13.02□□□□□ -0.32
H2AFV-201ENST00000222690 A6NJY4 79 aa13.02□□□□□ -0.32
H2AFV-201ENST00000222690 SCGB1C2P0DMR2 95 aa13.02□□□□□ -0.32
H2AFV-201ENST00000222690 MOB4Q9Y3A3 225 aa13.02□□□□□ -0.32
H2AFV-201ENST00000222690 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.33
H2AFV-201ENST00000222690 TRAV12-1A0A0B4J245 112 aa13.02□□□□□ -0.33
H2AFV-201ENST00000222690 FAM159AQ6UWV7 190 aa13.02□□□□□ -0.33
H2AFV-201ENST00000222690 CD7P09564 240 aa13.02□□□□□ -0.33
H2AFV-201ENST00000222690 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
H2AFV-201ENST00000222690 RHPN1-AS1Q9BWJ2 59 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 TRAV12-3A0A0B4J271 114 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 OVOL1O14753 267 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 KLRB1Q12918 225 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 ZFP2Q6ZN57 461 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 PTH2Q96A98 100 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 AJUBAQ96IF1 538 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 C20orf78Q9BR46 151 aa13.01□□□□□ -0.33
H2AFV-201ENST00000222690 IGHV4-4A0A075B6R2 117 aa13□□□□□ -0.33
H2AFV-201ENST00000222690 C11orf86A6NJI1 115 aa13□□□□□ -0.33
H2AFV-201ENST00000222690 HERVK_113P61574 105 aa13□□□□□ -0.33
H2AFV-201ENST00000222690 KIR2DL4Q99706 377 aa13□□□□□ -0.33
H2AFV-201ENST00000222690 HTN1P15515 57 aa13□□□□□ -0.33
H2AFV-201ENST00000222690 LMO4P61968 165 aa12.99□□□□□ -0.33
H2AFV-201ENST00000222690 MORN3Q6PF18 240 aaPredicted RBP12.99□□□□□ -0.33
H2AFV-201ENST00000222690 GPHB5Q86YW7 130 aa12.99□□□□□ -0.33
H2AFV-201ENST00000222690 U3KQE9 123 aa12.99□□□□□ -0.33
H2AFV-201ENST00000222690 DLX4Q92988 240 aaPredicted RBP12.99□□□□□ -0.33
H2AFV-201ENST00000222690 EDN2P20800 178 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
H2AFV-201ENST00000222690 ZNF56Q15929 161 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 PRSS47A8MTI9 375 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 H3BUX3 64 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 RNASE3P12724 160 aaKnown RBP12.98□□□□□ -0.33
H2AFV-201ENST00000222690 BLCAPP62952 87 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 SYT8Q8NBV8 401 aa12.98□□□□□ -0.33
H2AFV-201ENST00000222690 TRAV12-2A0A075B6T6 113 aa12.97□□□□□ -0.33
H2AFV-201ENST00000222690 FAM223BA6NKX1 122 aa12.97□□□□□ -0.33
H2AFV-201ENST00000222690 FAM223AQ8IWN6 122 aa12.97□□□□□ -0.33
H2AFV-201ENST00000222690 LY6DQ14210 128 aa12.97□□□□□ -0.33
H2AFV-201ENST00000222690 LENEPQ9Y5L5 61 aa12.97□□□□□ -0.33
H2AFV-201ENST00000222690 OPRPNQ99935 248 aaPredicted RBP12.96□□□□□ -0.33
H2AFV-201ENST00000222690 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.33
H2AFV-201ENST00000222690 ZNF688P0C7X2 276 aa12.96□□□□□ -0.33
H2AFV-201ENST00000222690 MUC4Q99102 2169 aa12.96□□□□□ -0.33
H2AFV-201ENST00000222690 NDUFA4O00483 81 aa12.96□□□□□ -0.34
H2AFV-201ENST00000222690 RAX2Q96IS3 184 aa12.96□□□□□ -0.34
H2AFV-201ENST00000222690 TSPAN13O95857 204 aa12.95□□□□□ -0.34
H2AFV-201ENST00000222690 Q5PR19 223 aa12.95□□□□□ -0.34
H2AFV-201ENST00000222690 CLEC2AQ6UVW9 174 aa12.95□□□□□ -0.34
H2AFV-201ENST00000222690 SUMO4Q6EEV6 95 aa12.95□□□□□ -0.34
H2AFV-201ENST00000222690 Q6ZS46 218 aa12.95□□□□□ -0.34
H2AFV-201ENST00000222690 CIDEAO60543 219 aa12.94□□□□□ -0.34
H2AFV-201ENST00000222690 PPP1R17O96001 155 aa12.94□□□□□ -0.34
H2AFV-201ENST00000222690 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
H2AFV-201ENST00000222690 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
H2AFV-201ENST00000222690 TMEM95Q3KNT9 176 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms