RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 H7C1H1 209 aa12.83□□□□□ -0.36
CTDP1-201ENST00000075430 DUSP14O95147 198 aaKnown RBP12.83□□□□□ -0.36
CTDP1-201ENST00000075430 NPC2P61916 151 aa12.83□□□□□ -0.36
CTDP1-201ENST00000075430 F8VRH5 84 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 OPRPNQ99935 248 aaPredicted RBP12.82□□□□□ -0.36
CTDP1-201ENST00000075430 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 NBL1P41271 181 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 TM2D2Q9BX73 214 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 BSNQ9UPA5 3926 aa12.82□□□□□ -0.36
CTDP1-201ENST00000075430 GEMIN7Q9H840 131 aaKnown RBP12.82□□□□□ -0.36
CTDP1-201ENST00000075430 TRBV6-1A0A0K0K1D8 114 aa12.81□□□□□ -0.36
CTDP1-201ENST00000075430 LY6LH3BQJ8 138 aa12.81□□□□□ -0.36
CTDP1-201ENST00000075430 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
CTDP1-201ENST00000075430 SUMO2P61956 95 aaKnown RBP12.81□□□□□ -0.36
CTDP1-201ENST00000075430 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
CTDP1-201ENST00000075430 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
CTDP1-201ENST00000075430 NRACQ8N912 160 aa12.81□□□□□ -0.36
CTDP1-201ENST00000075430 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
CTDP1-201ENST00000075430 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
CTDP1-201ENST00000075430 GATD1Q8NB37 220 aa12.8□□□□□ -0.36
CTDP1-201ENST00000075430 CRYBG3Q68DQ2 2970 aa12.79□□□□□ -0.36
CTDP1-201ENST00000075430 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
CTDP1-201ENST00000075430 SMPXQ9UHP9 88 aa12.79□□□□□ -0.36
CTDP1-201ENST00000075430 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 PRSS2P07478 247 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 PLNP26678 52 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 KLRB1Q12918 225 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 JMJD1CQ15652 2540 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 CRYBA4P53673 196 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 NFE4Q86UQ8 179 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 IGHV4-39P01824 125 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 ADORA2A-AS1P86434 159 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
CTDP1-201ENST00000075430 Q6ZS46 218 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 ZMAT4Q9H898 229 aa12.78□□□□□ -0.36
CTDP1-201ENST00000075430 IGLV2-18A0A075B6J9 118 aa12.77□□□□□ -0.36
CTDP1-201ENST00000075430 UNQ9165/PRO28630Q6UXU0 137 aa12.77□□□□□ -0.36
CTDP1-201ENST00000075430 C20orf173Q96LM9 149 aa12.77□□□□□ -0.36
CTDP1-201ENST00000075430 SAA4P35542 130 aa12.77□□□□□ -0.37
CTDP1-201ENST00000075430 DLX4Q92988 240 aaPredicted RBP12.77□□□□□ -0.37
CTDP1-201ENST00000075430 CCDC140Q96MF4 163 aa12.77□□□□□ -0.37
CTDP1-201ENST00000075430 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 Q8N9W7 124 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 RASL10AQ92737 203 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 CCDC168Q8NDH2 2452 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 GATA3P23771 443 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 FOXI1Q12951 378 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
CTDP1-201ENST00000075430 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 C11orf86A6NJI1 115 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 RNF5Q99942 180 aa12.76□□□□□ -0.37
CTDP1-201ENST00000075430 ASIPP42127 132 aa12.75□□□□□ -0.37
CTDP1-201ENST00000075430 OR10J6PQ8NGY7 276 aa12.75□□□□□ -0.37
CTDP1-201ENST00000075430 PF4V1P10720 104 aa12.75□□□□□ -0.37
CTDP1-201ENST00000075430 LRRK2Q5S007 2527 aa12.75□□□□□ -0.37
CTDP1-201ENST00000075430 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
CTDP1-201ENST00000075430 TRPT1Q86TN4 253 aaKnown RBP12.75□□□□□ -0.37
CTDP1-201ENST00000075430 TSPAN13O95857 204 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 NPBQ8NG41 125 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 TRAV12-2A0A075B6T6 113 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 TRAV12-3A0A0B4J271 114 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 C9JAW5 83 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 EDN2P20800 178 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
CTDP1-201ENST00000075430 XGP55808 180 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 SLC50A1Q9BRV3 221 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 BPESC1Q9GZL8 116 aa12.74□□□□□ -0.37
CTDP1-201ENST00000075430 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 CD7P09564 240 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 SS18L2Q9UHA2 77 aa12.73□□□□□ -0.37
CTDP1-201ENST00000075430 TCL1BO95988 128 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 ORMDL2Q53FV1 153 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 EEF1AKMT3Q96AZ1 226 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 CSMD2Q7Z408 3487 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 TMEM238LA0A1B0GVL6 79 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 A6NJY4 79 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 ZNF56Q15929 161 aa12.72□□□□□ -0.37
CTDP1-201ENST00000075430 FHL3Q13643 280 aa12.71□□□□□ -0.37
CTDP1-201ENST00000075430 RNF183Q96D59 192 aa12.71□□□□□ -0.37
CTDP1-201ENST00000075430 DPH3P1Q9H4G8 78 aa12.71□□□□□ -0.37
CTDP1-201ENST00000075430 MUC4Q99102 2169 aa12.71□□□□□ -0.37
CTDP1-201ENST00000075430 ABCA12Q86UK0 2595 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 A0A1W2PPR1 153 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 CRIP2P52943 208 aaPredicted RBP12.7□□□□□ -0.38
CTDP1-201ENST00000075430 C3orf56Q8N813 242 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 C1QTNF4Q9BXJ3 329 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 PRO0461Q9UI25 63 aa12.7□□□□□ -0.38
CTDP1-201ENST00000075430 LGALS3P17931 250 aaKnown RBP12.69□□□□□ -0.38
CTDP1-201ENST00000075430 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms