RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HAX1O00165 279 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 SNRPD3P62318 126 aaKnown RBP12.39□□□□□ -0.43
PHGDH-216ENST00000641375 HIST1H1AQ02539 215 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-216ENST00000641375 OR8A1Q8NGG7 326 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 SELENOKQ9Y6D0 94 aa12.39□□□□□ -0.43
PHGDH-216ENST00000641375 A0A1B0GUS0 222 aa12.38□□□□□ -0.43
PHGDH-216ENST00000641375 A0A1B0GW15 77 aa12.38□□□□□ -0.43
PHGDH-216ENST00000641375 NDUFA7O95182 113 aa12.38□□□□□ -0.43
PHGDH-216ENST00000641375 CRISP2P16562 243 aa12.38□□□□□ -0.43
PHGDH-216ENST00000641375 WFDC3Q8IUB2 231 aa12.38□□□□□ -0.43
PHGDH-216ENST00000641375 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 ORM1P02763 201 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 HNRNPA3P51991 378 aaKnown RBP12.37□□□□□ -0.43
PHGDH-216ENST00000641375 RIGQ13278 110 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 OR4C5Q8NGB2 326 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 CSTL1Q9H114 145 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 IGLC3P0DOY3 106 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 SLAQ13239 276 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
PHGDH-216ENST00000641375 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
PHGDH-216ENST00000641375 TSSC4Q9Y5U2 329 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-216ENST00000641375 TMSB15BA0A087X1C1 80 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 K7EQG2 157 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 CD28P10747 220 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 CD33P20138 364 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 LINC00310P59036 64 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 GDF5OSQ5U4N7 250 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 CBY3A6NI87 242 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-216ENST00000641375 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 VPS25Q9BRG1 176 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 TPPP3Q9BW30 176 aa12.36□□□□□ -0.43
PHGDH-216ENST00000641375 GRIFINA4D1Z8 144 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 ARMS2P0C7Q2 107 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 Q0VG73 95 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 ADAMTSL5Q6ZMM2 481 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 Q6ZN92 141 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 Q8N976 141 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 F6UB75 175 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 KIAA1644Q3SXP7 199 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 OR10J3Q5JRS4 329 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 LYZL1Q6UWQ5 148 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 FAM19A4Q96LR4 140 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 SSBP4Q9BWG4 385 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-216ENST00000641375 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
PHGDH-216ENST00000641375 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
PHGDH-216ENST00000641375 FHL3Q13643 280 aa12.34□□□□□ -0.43
PHGDH-216ENST00000641375 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
PHGDH-216ENST00000641375 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
PHGDH-216ENST00000641375 CITED2Q99967 270 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-216ENST00000641375 SERF1AO75920 110 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 SRIP30626 198 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 DEFB1P60022 68 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 PSMG4Q5JS54 123 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 CCL24O00175 119 aa12.33□□□□□ -0.44
PHGDH-216ENST00000641375 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 GPX1P07203 203 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 CSN3P07498 182 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 MAJINQ3KP22 176 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 OCIAD2Q56VL3 154 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 BAGE3Q86Y29 109 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 IGKV3D-20A0A0C4DH25 116 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 F2Z2F3 143 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 DYNLRB2Q8TF09 96 aa12.32□□□□□ -0.44
PHGDH-216ENST00000641375 EBLN2Q6P2I7 272 aa12.31□□□□□ -0.44
PHGDH-216ENST00000641375 CST9LQ9H4G1 147 aa12.31□□□□□ -0.44
PHGDH-216ENST00000641375 PROK1P58294 105 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 PRR9Q5T870 116 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 HIST2H2BDQ6DRA6 164 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 ZNF493Q6ZR52 646 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 ODF3Q96PU9 254 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 C11orf21Q9P2W6 132 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 NSD1Q96L73 2696 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-216ENST00000641375 A0A0J9YX75 114 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 TSPOP30536 169 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
PHGDH-216ENST00000641375 LOC102724200A0A096LPH7 203 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-216ENST00000641375 J3KRW8 73 aa12.29□□□□□ -0.44
PHGDH-216ENST00000641375 KRTDAPP60985 99 aa12.29□□□□□ -0.44
PHGDH-216ENST00000641375 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
PHGDH-216ENST00000641375 HIVEP1P15822 2718 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 KLLNB2CW77 178 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 DUSP14O95147 198 aaKnown RBP12.28□□□□□ -0.44
PHGDH-216ENST00000641375 DEFB114Q30KQ6 69 aa12.28□□□□□ -0.44
PHGDH-216ENST00000641375 TMEM61Q8N0U2 210 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms